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SCNpilot_cont_300_bf_scaffold_1620

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1620_1
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..904)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XYP4_9CYAN
capsule polysaccharide biosynthesis protein Tax=RBG_16_Chloroflexi_58_8_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1620_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(910..2376)
DNA (1467bp) protein (489aa)
Aldehyde dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IS5_RHOP5 rbh
aldehyde dehydrogenase rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABJ08159.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_1620_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2387..3199)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003725BE3 rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ08160.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="
SCNpilot_cont_300_bf_scaffold_1620_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3212..4297)
DNA (1086bp) protein (362aa)
N-acetylneuraminate synthase (EC:2.5.1.56) rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:ABJ08161.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ABJ08161.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac
N-acetylneuraminate synthase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IS3_RHOP5 rbh
SCNpilot_cont_300_bf_scaffold_1620_5
unknown

Not on your lists

4461..4958
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1620_6
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5003..5623
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KJV07507.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn1
SCNpilot_cont_300_bf_scaffold_1620_7
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5614..6570)
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KHM47293.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
SCNpilot_cont_300_bf_scaffold_1620_8
R_Chlamydiae_49_12, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6586..8406)
DNA (1821bp) protein (607aa)
N-acetylglucosaminyltransferase; K00737 beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144] Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_49_12_curated
Putative N-acetylglucosaminyltransferase id=2748471 bin=GWF2_Melainabacteria_37_15 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
N-acetylglucosaminyltransferase
SCNpilot_cont_300_bf_scaffold_1620_9
unknown

Not on your lists

comp(8435..9376)
DNA (942bp) protein (314aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1620_10
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9373..10080)
DNA (708bp) protein (236aa)
Methyltransferase FkbM family n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VNA8_9CYAN
Methyltransferase FkbM family {ECO:0000313|EMBL:AFZ09563.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis P
methyltransferase FkbM family
SCNpilot_cont_300_bf_scaffold_1620_11
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10257..11930
DNA (1674bp) protein (558aa)
Putative ligase {ECO:0000313|EMBL:EWS61158.1}; EC=6.2.1.- {ECO:0000313|EMBL:EWS61158.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="M
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036F8BD2 rbh
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_1620_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11936..12184
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000382931B
Acyl carrier protein {ECO:0000313|EMBL:EWS56192.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1620_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

12187..13008
DNA (822bp) protein (274aa)
Putative uncharacterized protein id=3333501 bin=GWF2_Lentisphaerae_57_35 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
SCNpilot_cont_300_bf_scaffold_1620_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13028..13918
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D866_BRAJP
Transporter {ECO:0000313|EMBL:KGT73833.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
transporter
SCNpilot_cont_300_bf_scaffold_1620_15
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(13915..14304)
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
SCNpilot_cont_300_bf_scaffold_1620_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16515..17327
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002F7CA6A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69210.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_cont_300_bf_scaffold_1620_17
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

17371..18609
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
SCNpilot_cont_300_bf_scaffold_1620_18
unknown

Not on your lists

18656..19885
DNA (1230bp) protein (410aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1620_19
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19920..20915)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
hypothetical protein id=2250618 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
SCNpilot_cont_300_bf_scaffold_1620_20
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(21273..22331)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002D84616
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
SCNpilot_cont_300_bf_scaffold_1620_21
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(22418..23611)
DNA (1194bp) protein (398aa)
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILL1_ANADE
group 1 glycosyl transferase Tax=RBG_16_Zixibacteria_53_22_curated
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1620_22
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(23618..24124)
DNA (507bp) protein (169aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=CG_Elusi_04
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITQ1_9SPHN
wecB; UDP-N-acetylglucosamine 2-epimerase
SCNpilot_cont_300_bf_scaffold_1620_23
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24090..24692)
DNA (603bp) protein (201aa)
udp-n-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH13_SINAD
UDP-N-acetylglucosamine 2-epimerase
SCNpilot_cont_300_bf_scaffold_1620_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24689..26161)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003781408
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCNpilot_cont_300_bf_scaffold_1620_25
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26320..27423
DNA (1104bp) protein (368aa)
TPR repeat-containing protein n=2 Tax=Rhodospirillum rubrum RepID=G2T9K8_RHORU
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABC21354.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (str
SCNpilot_cont_300_bf_scaffold_1620_26
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

27504..29174
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IQ8_RHOP5 rbh
capsule polysaccharide biosynthesis protein Tax=RBG_16_Chloroflexi_58_8_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1620_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(29171..30106)
DNA (936bp) protein (312aa)
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_300_bf_scaffold_1620_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(30113..31228)
DNA (1116bp) protein (372aa)
Methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cytidyltransferase-related enzyme id=4600879 bin=GWA2_Methylomirabilis_73_35 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_1620_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(31225..32205)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXU1_RHOCS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1620_30
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32202..33143)
DNA (942bp) protein (314aa)
a-glycosyltransferase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B9B5
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EAQ25818.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" sourc
glycosyltransferase, group 1
Displaying items 1-30 of 85 in total

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