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SCNpilot_cont_300_bf_scaffold_1850

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1850_1
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1376
DNA (1374bp) protein (458aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; A
Pyruvate kinase (EC:2.7.1.40) rbh
Pyruvate kinase n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QKQ2_9CAUL rbh
SCNpilot_cont_300_bf_scaffold_1850_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..2506)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HNT7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP74484.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
NHL repeat-containing protein
SCNpilot_cont_300_bf_scaffold_1850_3
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2598..4985)
DNA (2388bp) protein (796aa)
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein (EC:1.1.-.-)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4K8_9RHIZ rbh
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family {ECO:0000313|EMBL:EHS52320.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiac
SCNpilot_cont_300_bf_scaffold_1850_4
unknown

Not on your lists

comp(5071..5448)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1850_5
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5723..6262)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMR7_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02073.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" sourc
SCNpilot_cont_300_bf_scaffold_1850_6
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6517..7062)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFE8_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG09680.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
SCNpilot_cont_300_bf_scaffold_1850_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7123..7536)
DNA (414bp) protein (138aa)
UPF0178 protein Bresu_0172 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QII4_BRESC
hypothetical protein; K09768 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1850_8
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7533..9353)
DNA (1821bp) protein (607aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VL92_CAUST rbh
carbamoyl-phosphate synthase subunit L
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADG11265.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobac
SCNpilot_cont_300_bf_scaffold_1850_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..10918)
DNA (1560bp) protein (520aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZ34_9SPHN
methylcrotonoyl-CoA carboxylase
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AGH48980.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_1850_10
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10915..12081)
DNA (1167bp) protein (389aa)
isovaleryl-CoA dehydrogenase n=1 Tax=alpha proteobacterium L41A RepID=UPI000375FFB1
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:KJV40903.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimo
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1850_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12146..13774)
DNA (1629bp) protein (543aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
MmoS n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QUB1_9CAUL rbh
PAS domain S-box {ECO:0000313|EMBL:EJL22505.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_1850_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..13971)
DNA (189bp) protein (63aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_1850_13
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14150..15451
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IS33_METNO rbh
ProP protein {ECO:0000313|EMBL:BAQ45668.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_1850_14
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..16360
DNA (903bp) protein (301aa)
2-dehydro-3-deoxygalactonokinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE50_PHEZH
2-dehydro-3-deoxygalactonokinase
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:ACG78483.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phen
SCNpilot_cont_300_bf_scaffold_1850_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16357..16986
DNA (630bp) protein (210aa)
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE49_PHEZH
eda; 4-hydroxy-2-ketovalerate aldolase
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:ACG78482.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cauloba
SCNpilot_cont_300_bf_scaffold_1850_16
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17042..17542
DNA (501bp) protein (167aa)
general stress protein n=1 Tax=Xanthomonas oryzae RepID=UPI0002F0DB1D
General stress protein {ECO:0000313|EMBL:KGR59970.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola
general stress protein
SCNpilot_cont_300_bf_scaffold_1850_17
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(17549..19129)
DNA (1581bp) protein (527aa)
ABC-2 type transporter id=12554840 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 /
SCNpilot_cont_300_bf_scaffold_1850_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(19126..20052)
DNA (927bp) protein (309aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW98_OPITP
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACB76850.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
SCNpilot_cont_300_bf_scaffold_1850_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20127..22313)
DNA (2187bp) protein (729aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D841AE rbh
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AHG93160.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_cont_300_bf_scaffold_1850_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22822..23514
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0Z7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07171.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
SCNpilot_cont_300_bf_scaffold_1850_21
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

23526..25247
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002F1EC3F rbh
outer membrane cobalamin receptor protein-like protein Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
putative TonB-dependent receptor protein
SCNpilot_cont_300_bf_scaffold_1850_22
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25375..26109
DNA (735bp) protein (245aa)
Ribonuclease I n=1 Tax=Caulobacter sp. AP07 RepID=J2Q0Q3_9CAUL
Ribonuclease I {ECO:0000313|EMBL:EJL33682.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cauloba
ribonuclease T2
SCNpilot_cont_300_bf_scaffold_1850_23
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26106..27410)
DNA (1305bp) protein (435aa)
Putative poly(Aspartic acid) hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPV9_9SPHN
Di-/tripeptidase {ECO:0000313|EMBL:EZP69861.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
putative poly(aspartic acid) hydrolase
SCNpilot_cont_300_bf_scaffold_1850_24

Not on your lists

comp(27410..29098)
DNA (1689bp) protein (563aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=uncultured organism RepID=T1W5I8_9ZZZZ rbh
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AGU09951.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
type I phosphodiesterase/nucleotide pyrophosphatase
SCNpilot_cont_300_bf_scaffold_1850_25
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29268..29861)
DNA (594bp) protein (198aa)
OmpA/MotB domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMJ7_BRESC
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADL00167.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
SCNpilot_cont_300_bf_scaffold_1850_26
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30037..30954
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2G8Z5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL26235.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1850_27
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30961..32730)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4P7D1_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ81145.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
sensor histidine kinase/response regulator
SCNpilot_cont_300_bf_scaffold_1850_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32758..34905)
DNA (2148bp) protein (716aa)
diguanylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035FD73E rbh
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABD04762.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rh
SCNpilot_cont_300_bf_scaffold_1850_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35305..36900
DNA (1596bp) protein (532aa)
MaoA_B; flavin monoamine oxidase-related protein (EC:1.4.3.4)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000362FED3 rbh
Flavin monoamine oxidase {ECO:0000313|EMBL:KGM31862.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limo
SCNpilot_cont_300_bf_scaffold_1850_30
Komagataeibacter europaeus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36921..37355
DNA (435bp) protein (145aa)
alcohol dehydrogenase n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237D90F
Cytochrome c {ECO:0000313|EMBL:GAN97170.1}; TaxID=1234669 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter europ
Cytochrome c class I
Displaying items 1-30 of 36 in total

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