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SCNpilot_cont_300_bf_scaffold_1877

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1877_1
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..627
DNA (627bp) protein (209aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KFI07477.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KFI07477.1};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacterace
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Massilia niastensis RepID=UPI00036F46FC
SCNpilot_cont_300_bf_scaffold_1877_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1501
DNA (831bp) protein (277aa)
Dehydratase, IlvD/Edd family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGG9_PHEZH
dihydroxy-acid dehydratase
Dehydratase, IlvD/Edd family {ECO:0000313|EMBL:ACG78875.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
SCNpilot_cont_300_bf_scaffold_1877_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1775..3715
DNA (1941bp) protein (647aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY00_CAUSK rbh
peptidase S9 prolyl oligopeptidase rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ABZ70323.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Ca
SCNpilot_cont_300_bf_scaffold_1877_4
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3727..4458)
DNA (732bp) protein (244aa)
Sterol desaturase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GN32_9PSED
Sterol desaturase {ECO:0000313|EMBL:EJM69965.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
fatty acid hydroxylase superfamily protein
SCNpilot_cont_300_bf_scaffold_1877_5
unknown

Not on your lists

comp(4503..4793)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_6
unknown

Not on your lists

comp(4995..5213)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5404..6096)
DNA (693bp) protein (231aa)
Alternative oxidase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLW0_CAUST rbh
Alternative oxidase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
alternative oxidase
SCNpilot_cont_300_bf_scaffold_1877_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6245..8290
DNA (2046bp) protein (682aa)
fixL; sensory box histidine kinase FixL; K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGI6_SPHWW rbh
SCNpilot_cont_300_bf_scaffold_1877_9
unknown

Not on your lists

8369..8479
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..9161)
DNA (702bp) protein (234aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.1
Phosphoglycolate phosphatase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLM5_CAUST rbh
phosphoglycolate phosphatase
SCNpilot_cont_300_bf_scaffold_1877_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9211..10569
DNA (1359bp) protein (453aa)
Bifunctional protein GlmU n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T735_CAUSK rbh
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caul
SCNpilot_cont_300_bf_scaffold_1877_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10572..11255
DNA (684bp) protein (228aa)
rpiA; ribose-5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Ribose-5-phosphate isomerase A n=1 Tax=Caulobacter sp. (strain K31) RepID=RPIA_CAUSK rbh
rpiA; ribose-5-phosphate isomerase A
SCNpilot_cont_300_bf_scaffold_1877_13
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11271..12662
DNA (1392bp) protein (464aa)
Glutathione-disulfide reductase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLM2_CAUST rbh
glutathione-disulfide reductase
Glutathione-disulfide reductase {ECO:0000313|EMBL:ADG11395.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacte
SCNpilot_cont_300_bf_scaffold_1877_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12659..13921
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ATR4_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL37711.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
O-antigen polymerase
SCNpilot_cont_300_bf_scaffold_1877_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14009..15388
DNA (1380bp) protein (460aa)
3-deoxy-7-phosphoheptulonate synthase, class II n=1 Tax=Caulobacter sp. AP07 RepID=J2QC61_9CAUL rbh
3-deoxy-7-phosphoheptulonate synthase, class II {ECO:0000313|EMBL:EJL37712.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" s
dhs; phospho-2-dehydro-3-deoxyheptonate aldolase
SCNpilot_cont_300_bf_scaffold_1877_16
unknown

Not on your lists

15470..15694
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_17
unknown

Not on your lists

15765..15989
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16060..17409
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK6_PHEZH rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ACG78396.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobac
SCNpilot_cont_300_bf_scaffold_1877_19
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17885..18970
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037E3D7E rbh
PAS/PAC sensor hybrid histidine kinase Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_1877_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18967..19866)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PE67_9CAUL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJL25517.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
SCNpilot_cont_300_bf_scaffold_1877_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20065..21021
DNA (957bp) protein (319aa)
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2J2_9SPHN
DNA, contig: SP659 {ECO:0000313|EMBL:GAN15535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
RND transporter
SCNpilot_cont_300_bf_scaffold_1877_22
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21031..22197
DNA (1167bp) protein (389aa)
HlyD family secretion protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPG2_9SPHN
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:BAK68143.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
SCNpilot_cont_300_bf_scaffold_1877_23
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22307..24118
DNA (1812bp) protein (604aa)
Glucosyl transferase family 2 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSI5_9SPHN
Glucosyl transferase family 2 {ECO:0000313|EMBL:EQB19291.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
glucosyl transferase family 2
SCNpilot_cont_300_bf_scaffold_1877_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24138..24434
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM89_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:KJB94576.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1877_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24437..25378)
DNA (942bp) protein (314aa)
Putative araC-like transcription regulator n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKN0_9BRAD rbh
Putative araC-like transcription regulator {ECO:0000313|EMBL:CCE07018.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1877_26
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25459..26487
DNA (1029bp) protein (343aa)
Putative CoA reductase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKM9_9BRAD
Putative CoA reductase {ECO:0000313|EMBL:CCE07017.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
CoA reductase
SCNpilot_cont_300_bf_scaffold_1877_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26528..27046)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB94266.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
SCNpilot_cont_300_bf_scaffold_1877_28
unknown

Not on your lists

comp(27210..27383)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1877_29
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27391..29196)
DNA (1806bp) protein (602aa)
Glycosyl transferase family 2 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3P7_CAUSK rbh
glucosyltransferase MdoH
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABZ72361.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_1877_30
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29558..30415
DNA (858bp) protein (286aa)
Oxidoreductase domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIU0_CAUST rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADG09906.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
Displaying items 1-30 of 44 in total

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