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SCNpilot_cont_300_bf_scaffold_924

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_924_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..702)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BA36_RUBGE
Uncharacterized protein {ECO:0000313|EMBL:CCF78633.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_924_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(712..1698)
DNA (987bp) protein (329aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D336_CAUCE rbh
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:ENZ82835.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
2-hydroxyacid dehydrogenase
SCNpilot_cont_300_bf_scaffold_924_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1810..2280
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7B5_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ74179.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
SCNpilot_cont_300_bf_scaffold_924_4
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2346..2852
DNA (507bp) protein (169aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VQ07_CAUST rbh
SCNpilot_cont_300_bf_scaffold_924_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..4130
DNA (1227bp) protein (409aa)
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19625 rbh
fabB; 3-oxoacyl-ACP synthase
3-oxoacyl-(Acyl-carrier-protein) synthase I {ECO:0000313|EMBL:ACG76442.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
SCNpilot_cont_300_bf_scaffold_924_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4133..4807
DNA (675bp) protein (225aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC63_PHEZH rbh
trmB; tRNA (guanine-N(7)-)-methyltransferase
SCNpilot_cont_300_bf_scaffold_924_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4812..5105)
DNA (294bp) protein (98aa)
FlhB-related protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZ04_CAUSK
flhB-like protein
FlhB-related protein {ECO:0000313|EMBL:ABZ71915.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (stra
SCNpilot_cont_300_bf_scaffold_924_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5102..6880)
DNA (1779bp) protein (593aa)
flagellar hook-length control protein FliK n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D3AD5
Uncharacterized protein {ECO:0000313|EMBL:BAR53200.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_924_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..7525)
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000255|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000255|HAMAP-Rule:MF_00209}; Short=PPase {ECO:0000255|
inorganic pyrophosphatase n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI0003773A55 rbh
inorganic pyrophosphatase
SCNpilot_cont_300_bf_scaffold_924_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7765..8331
DNA (567bp) protein (189aa)
Ribosome maturation factor RimP n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RIMP_PHEZH rbh
hypothetical protein rbh
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="P
SCNpilot_cont_300_bf_scaffold_924_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8335..10014
DNA (1680bp) protein (560aa)
N utilization substance protein A n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GX00_CAUCN rbh
nusA; N utilization substance protein A NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulob
SCNpilot_cont_300_bf_scaffold_924_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10028..10702
DNA (675bp) protein (225aa)
Predicted nucleic-acid-binding protein implicated in transcription termination n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC56_PHEZH
hypothetical protein
Predicted nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:ACG79849.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caul
SCNpilot_cont_300_bf_scaffold_924_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10788..13790
DNA (3003bp) protein (1001aa)
translation initiation factor IF-2 n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00035CE690
protein translation initiation factor 2 IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
SCNpilot_cont_300_bf_scaffold_924_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13914..14423
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EAB2_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82423.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_924_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14429..14995
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ALL9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL33671.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_924_16
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15037..15459
DNA (423bp) protein (141aa)
ribosome-binding factor A n=1 Tax=alpha proteobacterium L41A RepID=UPI00037D533B
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rbfA; ribosome-binding factor A
SCNpilot_cont_300_bf_scaffold_924_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15443..16372
DNA (930bp) protein (310aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC50_PHEZH rbh
truB; tRNA pseudouridine synthase B
SCNpilot_cont_300_bf_scaffold_924_18
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16388..16657
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RS15_CAUCN
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
30S ribosomal protein S15
SCNpilot_cont_300_bf_scaffold_924_19
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16864..19014
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=129203
polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase (EC:2.7.7.8) rbh
polynucleotide phosphorylase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003634B80 rbh
SCNpilot_cont_300_bf_scaffold_924_20
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19103..19504)
DNA (402bp) protein (134aa)
Transcriptional regulator, XRE family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4G6_CAUSK
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABZ69466.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caul
SCNpilot_cont_300_bf_scaffold_924_21
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19560..20687)
DNA (1128bp) protein (376aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
Apolipoprotein N-acyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2QB01_9CAUL rbh
apolipoprotein N-acyltransferase
Displaying 21 items

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