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SCNpilot_cont_300_bf_scaffold_2148

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2148_1
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1043
DNA (1041bp) protein (347aa)
PepSY-associated TM helix domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0F6_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KJS25301.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c
PepSY-associated TM helix domain-containing protein
SCNpilot_cont_300_bf_scaffold_2148_2
unknown

Not on your lists

1170..1817
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2148_3
unknown

Not on your lists

1783..2007
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2148_4
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2026..2793)
DNA (768bp) protein (256aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B71265
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCA90517.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
SCNpilot_cont_300_bf_scaffold_2148_5
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

2936..3670
DNA (735bp) protein (245aa)
Methyltransferase type 11 (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZSA5_9BACT
Methyltransferase type 11 {ECO:0000313|EMBL:KKT48575.1}; TaxID=1618392 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_44_18.;"
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_2148_6
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3763..5196
DNA (1434bp) protein (478aa)
Polysaccharide biosynthesis protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LSM4_METRJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC53967.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas na
polysaccharide biosynthesis protein rbh
SCNpilot_cont_300_bf_scaffold_2148_7
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5247..6296
DNA (1050bp) protein (350aa)
Glycosyl transferase family 2 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBG9_BEII9
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACB96595.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia in
SCNpilot_cont_300_bf_scaffold_2148_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6478..7350)
DNA (873bp) protein (291aa)
glutathione S-transferase n=1 Tax=Variovorax paradoxus RepID=UPI0003653715 rbh
putative glutathione S-transferase rbh
Putative glutathione S-transferase {ECO:0000313|EMBL:AGU53488.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_cont_300_bf_scaffold_2148_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7347..7958)
DNA (612bp) protein (204aa)
Gst n=1 Tax=Variovorax paradoxus RepID=UPI00037A9E72 rbh
putative glutathione S-transferase
Putative glutathione S-transferase {ECO:0000313|EMBL:AGU53489.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_cont_300_bf_scaffold_2148_10
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8096..8278)
DNA (183bp) protein (61aa)
NADH:flavin oxidoreductase n=1 Tax=Flavobacterium rivuli RepID=UPI0003716C6D
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KGO86643.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
putative NADH:flavin oxidoreductase
SCNpilot_cont_300_bf_scaffold_2148_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8272..9183)
DNA (912bp) protein (304aa)
Putative NADH:flavin oxidoreductase n=1 Tax=Variovorax paradoxus B4 RepID=T1XMI2_VARPD rbh
putative NADH:flavin oxidoreductase
Putative NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGU53499.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_cont_300_bf_scaffold_2148_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9321..10187
DNA (867bp) protein (289aa)
transcriptional regulator, LysR family (EC:4.2.1.1)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J2RNZ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHE54148.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_2148_13
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10221..10439)
DNA (219bp) protein (73aa)
Sodium dependent nucleoside transporter n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4P5S0_9CAUL
na+ dependent nucleoside transporter domain-containing protein; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
na+ dependent nucleoside transporter domain-containing protein
SCNpilot_cont_300_bf_scaffold_2148_14
unknown

Not on your lists

10493..10669
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2148_15
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10697..11404)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I5T0_9SPHN
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EZP74278.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
CarD family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2148_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11515..12207)
DNA (693bp) protein (231aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R837_PHEZH
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACG77570.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sou
SCNpilot_cont_300_bf_scaffold_2148_17
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12863..13573
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036AC235
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG96804.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hyd
SCNpilot_cont_300_bf_scaffold_2148_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13545..13883
DNA (339bp) protein (113aa)
Dentin sialophosphoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVP4_BREDI
Dentin sialophosphoprotein {ECO:0000313|EMBL:EGF96673.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2148_19
unknown

Not on your lists

comp(13769..14056)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2148_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14442..15029
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ1_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78897.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_2148_21
unknown

Not on your lists

15026..15580
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2148_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15741..16895)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ0_PHEZH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACG78896.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_2148_23
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17070..18326)
DNA (1257bp) protein (419aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RQE3_ASTEC rbh
na+ dependent nucleoside transporter domain-containing protein; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
na+ dependent nucleoside transporter domain-containing protein
SCNpilot_cont_300_bf_scaffold_2148_24
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18609..19748
DNA (1140bp) protein (380aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGT2_PHEZH rbh
transporter; K02004 putative ABC transport system permease protein Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
antimicrobial peptide ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2148_25
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19745..20506
DNA (762bp) protein (254aa)
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZFC2_9CAUL
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2148_26
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..21444
DNA (657bp) protein (219aa)
Secretion protein HlyD family protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4U0_CAUSK
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABZ72467.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobac
SCNpilot_cont_300_bf_scaffold_2148_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21458..21718
DNA (261bp) protein (87aa)
Oligoendopeptidase Pe PF, putative n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L1D7_9SPHN
oligoendopeptidase F
Oligoendopeptidase F {ECO:0000313|EMBL:AJP74715.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
Displaying 27 items

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