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SCNpilot_cont_300_bf_scaffold_2159

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2159_1
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2018
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5S7_9SPHN
Scaffold26, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30391.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_2
unknown

Not on your lists

comp(2373..2630)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2159_3
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3053..3892)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB5_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EYD76957.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" sourc
oxidoreductase
SCNpilot_cont_300_bf_scaffold_2159_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3892..5082)
DNA (1191bp) protein (397aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VK53_CAUST rbh
alcohol dehydrogenase GroES domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_300_bf_scaffold_2159_5
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6732)
DNA (846bp) protein (282aa)
Transcriptional regulator n=1 Tax=Asticcacaulis sp. AC402 RepID=V4MZ94_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:ESQ74722.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2159_6
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6940..7884
DNA (945bp) protein (315aa)
Mannose-6-phosphate isomerase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFP8_TERRK
mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:AFL88066.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus r
SCNpilot_cont_300_bf_scaffold_2159_7
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7913..9742
DNA (1830bp) protein (610aa)
gcd; quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0IC47_9SPHN
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:KER35422.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
SCNpilot_cont_300_bf_scaffold_2159_8
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9745..10206)
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z896_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AJR26239.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_9
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10236..11033)
DNA (798bp) protein (266aa)
L-galactonate transporter n=1 Tax=Burkholderia kururiensis RepID=UPI00034B0F74 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KIG10614.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_2159_10
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11042..11455)
DNA (414bp) protein (138aa)
Major facilitator superfamily protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CYV6_9BURK
Major facilitator superfamily protein {ECO:0000313|EMBL:EIJ48799.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="H
yjiZ; major facilitator superfamily MFS_1 protein
SCNpilot_cont_300_bf_scaffold_2159_11
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11616..13946
DNA (2331bp) protein (777aa)
Transcriptional initiation protein Tat n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PUK5_9CAUL rbh
Transcriptional initiation protein Tat {ECO:0000313|EMBL:ESQ89240.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_12
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13918..14592
DNA (675bp) protein (225aa)
hypothetical protein id=12557092 bin=CNBR_ACIDO species=Sphingomonas sp. LH128 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EZP83181.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14748..15437
DNA (690bp) protein (230aa)
Putative acyltransferase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CY98_CAUCE
Putative acyltransferase {ECO:0000313|EMBL:ENZ81255.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cres
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_2159_14

Not on your lists

comp(15522..16796)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QGJ7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI06358.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17081..17278)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_2159_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17487..17912
DNA (426bp) protein (142aa)
Heat shock protein HSP20 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ8_PHEZH
heat shock protein Hsp20
Heat shock protein HSP20 {ECO:0000313|EMBL:ACG76597.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacte
SCNpilot_cont_300_bf_scaffold_2159_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17998..18267
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ7_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76596.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_2159_18
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18347..18808)
DNA (462bp) protein (154aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T678_CAUSK
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ABZ74081.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour
SCNpilot_cont_300_bf_scaffold_2159_19
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18897..19535)
DNA (639bp) protein (213aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T677_CAUSK
sigma 54 modulation protein/30S ribosomal protein S30EA
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ABZ74080.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
SCNpilot_cont_300_bf_scaffold_2159_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19597..20223)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ4_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20298..21797)
DNA (1500bp) protein (500aa)
RNA polymerase sigma-54 factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ3_PHEZH rbh
rpoN; RNA polymerase factor sigma-54
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phen
SCNpilot_cont_300_bf_scaffold_2159_22
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21977..23641
DNA (1665bp) protein (555aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulob
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Caulobacter crescentus OR37 RepID=R0D2H7_CAUCE
enoyl-(acyl-carrier-protein) reductase
SCNpilot_cont_300_bf_scaffold_2159_23
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23638..25143)
DNA (1506bp) protein (502aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cauloba
2-polyprenylphenol 6-hydroxylase accessory protein ubiB n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GVY6_CAUCN rbh
ubiquinone biosynthesis protein AarF
SCNpilot_cont_300_bf_scaffold_2159_24
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25145..25321)
DNA (177bp) protein (59aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000255|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=UBIE_PHEZH
ubiE; ubiquinone/menaquinone biosynthesis methlytransferase UbiE
SCNpilot_cont_300_bf_scaffold_2159_25
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25907..26773
DNA (867bp) protein (289aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) rbh
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPZ3_CAUST rbh
SCNpilot_cont_300_bf_scaffold_2159_26
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26782..27642
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC44_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2159_27
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27672..28460
DNA (789bp) protein (263aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ENZ82819.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ENZ82819.1};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulob
Short chain enoyl-CoA hydratase n=1 Tax=Caulobacter crescentus OR37 RepID=R0ELN2_CAUCE rbh
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_2159_28
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28580..28849
DNA (270bp) protein (90aa)
30S ribosomal protein S20 n=1 Tax=alpha proteobacterium L41A RepID=UPI00035D137A
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundim
30S ribosomal protein S20
SCNpilot_cont_300_bf_scaffold_2159_29
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29223..30281
DNA (1059bp) protein (353aa)
chromosomal replication initiation protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003617491 rbh
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; C
SCNpilot_cont_300_bf_scaffold_2159_30
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30238..30681
DNA (444bp) protein (148aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Caulobacter crescentus OR37 RepID=R0EP43_CAUCE
dnaA; chromosome replication initiator protein DnaA
Chromosomal replication initiator protein DnaA; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (s
Displaying items 1-30 of 34 in total

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