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SCNpilot_cont_300_bf_scaffold_2507

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2507_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1775
DNA (1773bp) protein (591aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ABZ73695.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABZ73695.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterale
DNA polymerase III subunit gamma/tau n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036AAC16 rbh
SCNpilot_cont_300_bf_scaffold_2507_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1785..2054
DNA (270bp) protein (90aa)
Nucleoid-associated protein PHZ_c0369 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=Y369_PHEZH
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2507_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2804..4030
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PYN1_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL32942.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2507_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4062..4583
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D4M1_CAUCE
SCNpilot_cont_300_bf_scaffold_2507_5
unknown

Not on your lists

4580..4711
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2507_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4721..5113)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1S8_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ73689.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
SCNpilot_cont_300_bf_scaffold_2507_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5152..6138
DNA (987bp) protein (329aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
methionyl-tRNA formyltransferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037E1330 rbh
methionyl-tRNA formyltransferase
SCNpilot_cont_300_bf_scaffold_2507_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6138..6893
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
PREDICTED: tRNA pseudouridine synthase-like 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AEFB rbh
SCNpilot_cont_300_bf_scaffold_2507_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6923..7348
DNA (426bp) protein (142aa)
Membrane protein n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4M6_9BACT
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ACE75593.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41186.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source=
SCNpilot_cont_300_bf_scaffold_2507_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7353..8507)
DNA (1155bp) protein (385aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
PREDICTED: probable carboxypeptidase PMAA_093910-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C114EA rbh
succinyl-diaminopimelate desuccinylase
SCNpilot_cont_300_bf_scaffold_2507_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8554..9033
DNA (480bp) protein (160aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VP80_CAUST
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADG12303.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Ca
SCNpilot_cont_300_bf_scaffold_2507_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..9563)
DNA (534bp) protein (178aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1292034 species="B
2'-5' RNA ligase (EC:6.5.1.-)
2'-5' RNA ligase n=1 Tax=Caulobacter crescentus OR37 RepID=R0ELI2_CAUCE
SCNpilot_cont_300_bf_scaffold_2507_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9628..10464
DNA (837bp) protein (279aa)
hydrolase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037A462D
HAD family hydrolase
HAD-superfamily subfamily IIA hydrolase like protein {ECO:0000313|EMBL:ABZ73175.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.
SCNpilot_cont_300_bf_scaffold_2507_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10346..11053)
DNA (708bp) protein (236aa)
Putative transcriptional regulator n=4 Tax=Bordetella RepID=K0M9T1_BORPB
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:KCV64697.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordet
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2507_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..11600)
DNA (489bp) protein (163aa)
Fur family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037A712F
ferric uptake regulator family protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJL26838.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo
SCNpilot_cont_300_bf_scaffold_2507_16
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11636..11818)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:ADK99458.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas su
SCNpilot_cont_300_bf_scaffold_2507_17
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11903..12955)
DNA (1053bp) protein (351aa)
Deoxyhypusine synthase-like protein {ECO:0000256|HAMAP-Rule:MF_00640}; EC=2.5.-.- {ECO:0000256|HAMAP-Rule:MF_00640};; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobactera
Deoxyhypusine synthase-like protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4QDQ2_9CAUL rbh
deoxyhypusine synthase
SCNpilot_cont_300_bf_scaffold_2507_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13043..13462)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00037803DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57646.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
SCNpilot_cont_300_bf_scaffold_2507_19
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13490..14764)
DNA (1275bp) protein (425aa)
Diaminopimelate decarboxylase n=1 Tax=Caulobacter crescentus OR37 RepID=R0ELI5_CAUCE rbh
Diaminopimelate decarboxylase {ECO:0000313|EMBL:ENZ81977.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
Orn/DAP/Arg decarboxylase 2
SCNpilot_cont_300_bf_scaffold_2507_20
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..16017
DNA (792bp) protein (264aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alpha
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VNX3_CAUST rbh
phosphonate ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_2507_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16014..16952
DNA (939bp) protein (313aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB81_PHEZH
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ACG79726.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacterace
SCNpilot_cont_300_bf_scaffold_2507_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16949..17776
DNA (828bp) protein (276aa)
Phosphonate transport system permease protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB80_PHEZH rbh
phnE; phosphonate transport system permease
Phosphonate transport system permease protein {ECO:0000313|EMBL:ACG79725.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;"
SCNpilot_cont_300_bf_scaffold_2507_23
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17825..18499
DNA (675bp) protein (225aa)
Glycosyl transferase, family 2 n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ATT0_MARMM rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABI64307.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis ma
SCNpilot_cont_300_bf_scaffold_2507_24
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18522..20132
DNA (1611bp) protein (537aa)
Glycosyl transferase family 39 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HDL8_GLUDA rbh
hypothetical protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ACI51648.1}; Uncharacterized protein {ECO:0000313|EMBL:CAP55118.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
SCNpilot_cont_300_bf_scaffold_2507_25
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20129..20482
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:ABI64309.1}; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="M
SCNpilot_cont_300_bf_scaffold_2507_26
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..20789
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ATS8_MARMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI64309.1}; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="M
SCNpilot_cont_300_bf_scaffold_2507_27
unknown

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comp(20797..20892)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 27 items

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