ggKbase home page

SCNpilot_cont_300_bf_scaffold_2630

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2630_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
prolyl oligopeptidase (EC:3.4.21.26)
Serine protease, S9A family peptidase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBF1_CAUCE
Serine protease, S9A family peptidase {ECO:0000313|EMBL:ENZ82788.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
SCNpilot_cont_300_bf_scaffold_2630_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

450..866
DNA (417bp) protein (139aa)
CHRD domain-containing protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNR8_MESAW
CHRD domain-containing protein {ECO:0000313|EMBL:KIZ36603.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
CHRD domain-containing protein
SCNpilot_cont_300_bf_scaffold_2630_3
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1068..1895
DNA (828bp) protein (276aa)
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Caulobacter sp. (strain K31) RepID=DAPF_CAUSK rbh
SCNpilot_cont_300_bf_scaffold_2630_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1892..3415
DNA (1524bp) protein (508aa)
2-methylthioadenine synthetase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE3_PHEZH rbh
2-methylthioadenine synthetase
2-methylthioadenine synthetase {ECO:0000313|EMBL:ACG76542.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenyl
SCNpilot_cont_300_bf_scaffold_2630_5
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..4188)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VQ27_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG12600.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
SCNpilot_cont_300_bf_scaffold_2630_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4196..4612)
DNA (417bp) protein (139aa)
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX94_9RHIZ
Glutathione-dependent formaldehyde-activating GFA
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:CDN48776.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_cont_300_bf_scaffold_2630_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4616..5080)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ97_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71227.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5077..5424)
DNA (348bp) protein (116aa)
Regulatory protein ArsR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZK3_9RHIZ
Regulatory protein ArsR {ECO:0000313|EMBL:EHK53810.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alh
regulatory protein ArsR
SCNpilot_cont_300_bf_scaffold_2630_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5502..6449
DNA (948bp) protein (316aa)
Signal recognition particle receptor FtsY n=1 Tax=Caulobacter sp. AP07 RepID=J2PS14_9CAUL rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria
signal recognition particle-docking protein FtsY
SCNpilot_cont_300_bf_scaffold_2630_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..7048
DNA (600bp) protein (200aa)
Probable intracellular septation protein A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE7_PHEZH
intracellular septation protein A
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulo
SCNpilot_cont_300_bf_scaffold_2630_11
unknown

Not on your lists

comp(7061..7333)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2630_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7404..9392)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GYY3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB05153.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9462..9851
DNA (390bp) protein (130aa)
MerR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631AD8
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:GAO38397.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2630_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9848..10375)
DNA (528bp) protein (176aa)
thiol:disulfide interchange protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000367641C
cycY; thiol:disulfide interchange protein CycY; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
thiol:disulfide interchange protein CycY
SCNpilot_cont_300_bf_scaffold_2630_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10386..10538)
DNA (153bp) protein (51aa)
Heme exporter protein CcmD n=1 Tax=Caulobacter sp. AP07 RepID=J2GPB1_9CAUL
Heme exporter protein CcmD {ECO:0000313|EMBL:EJL24608.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sou
SCNpilot_cont_300_bf_scaffold_2630_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10543..11280)
DNA (738bp) protein (246aa)
Heme ABC transporter, permease protein (Involved in cytochrome-c biogenesis) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF1_PHEZH rbh
ccmC; heme ABC transporter permease
Heme ABC transporter, permease protein (Involved in cytochrome-c biogenesis) {ECO:0000313|EMBL:ACG76550.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulob
SCNpilot_cont_300_bf_scaffold_2630_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11323..11946)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2G4L4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL24610.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12096..12761)
DNA (666bp) protein (222aa)
Heme exporter protein B n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VQ17_CAUST rbh
heme exporter protein Ccmb
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segn
SCNpilot_cont_300_bf_scaffold_2630_19
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12758..13369)
DNA (612bp) protein (204aa)
ccmA; cytochrome c biogenesis ATP-binding export protein CcmA (EC:3.6.3.41)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000255|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000255|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000255|HAMAP-Rule:MF_01707}; Ta
Cytochrome c biogenesis ATP-binding export protein CcmA n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=CCMA_CAUCR
SCNpilot_cont_300_bf_scaffold_2630_20
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13544..16249
DNA (2706bp) protein (902aa)
acnA; aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PREDICTED: aconitate hydratase 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B1F3 rbh
aconitate hydratase
SCNpilot_cont_300_bf_scaffold_2630_21
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16456..16998
DNA (543bp) protein (181aa)
Putative secreted protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GSB5_9CAUL
Putative secreted protein {ECO:0000313|EMBL:EJL25713.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_22
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17338..17685
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBD4_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82768.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_23
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17765..18517)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCG0_PHEZH rbh
hypothetical protein; K06890 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2630_24
unknown

Not on your lists

18649..18873
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2630_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18909..19256
DNA (348bp) protein (116aa)
Acyl-CoA thioesterase I tesA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCG1_PHEZH
tesA; acyl-CoA thioesterase
Acyl-CoA thioesterase I tesA {ECO:0000313|EMBL:ACG76560.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
SCNpilot_cont_300_bf_scaffold_2630_26
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19306..20385
DNA (1080bp) protein (360aa)
ABC transporter ATP-binding protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A8539E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIF23987.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
oligopeptide/dipeptide ABC transporter ATPase
Displaying 26 items

View Taxonomy