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SCNpilot_cont_300_bf_scaffold_2769

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2769_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..296)
DNA (294bp) protein (98aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX47_9SPHN
DNA, contig: SP630 {ECO:0000313|EMBL:GAN13986.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_2769_2
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(435..824)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDJ6_9SPHN
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29440.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2769_3
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(825..1811)
DNA (987bp) protein (329aa)
xylose isomerase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5B588
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29439.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
xylose isomerase-like TIM barrel domain-containing protein
SCNpilot_cont_300_bf_scaffold_2769_4
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2066..3031
DNA (966bp) protein (322aa)
monooxygenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E8B330
Uncharacterized protein {ECO:0000313|EMBL:KFL46784.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
2-polyprenyl-6-methoxyphenol hydroxylase
SCNpilot_cont_300_bf_scaffold_2769_5
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3221..4408
DNA (1188bp) protein (396aa)
major facilitator transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002632210 rbh
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29443.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_2769_6
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4413..6059
DNA (1647bp) protein (549aa)
glucose-methanol-choline oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E7B rbh
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29444.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
choline dehydrogenase
SCNpilot_cont_300_bf_scaffold_2769_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6056..6961
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HIM0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12842.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
Transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2769_8
unknown

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7253..7435
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2769_9
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7474..8214
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000379D034
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD05698.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_cont_300_bf_scaffold_2769_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8211..9263
DNA (1053bp) protein (351aa)
Serine/threonine kinase n=2 Tax=Methanosarcina mazei RepID=M1QJS2_METMZ
Uncharacterized protein {ECO:0000313|EMBL:ETW98742.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
serine/threonine kinase
SCNpilot_cont_300_bf_scaffold_2769_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9298..10176
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366D52C
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABJ86294.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
SCNpilot_cont_300_bf_scaffold_2769_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10588..11934
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B8E6F
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ81546.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
SCNpilot_cont_300_bf_scaffold_2769_13
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11991..12392)
DNA (402bp) protein (134aa)
Cyclase family protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHR1_9GAMM
Cyclase family protein {ECO:0000313|EMBL:EED33377.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
cyclase family protein
SCNpilot_cont_300_bf_scaffold_2769_14
unknown

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12446..12652
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2769_15
Pseudomonas sp. GM24, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12692..13672)
DNA (981bp) protein (327aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=2 Tax=Pseudomonas RepID=J2N787_9PSED rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJM44353.1}; TaxID=1144326 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
fumarylacetoacetate hydrolase
SCNpilot_cont_300_bf_scaffold_2769_16
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13674..14462)
DNA (789bp) protein (263aa)
UPI0003CFE640 related cluster n=1 Tax=unknown RepID=UPI0003CFE640
Glyoxalase {ECO:0000313|EMBL:ESZ85513.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_2769_17
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14813..15961
DNA (1149bp) protein (383aa)
hydrolase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000361FA63 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF83710.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knack
SCNpilot_cont_300_bf_scaffold_2769_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16156..18678
DNA (2523bp) protein (841aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2B4_9BACT
membrane-bound dehydrogenase domain protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:CCG98267.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuar
SCNpilot_cont_300_bf_scaffold_2769_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18764..20020
DNA (1257bp) protein (419aa)
esterase; K07214 enterochelin esterase and related enzymes id=12556821 bin=CNBR_ACIDO species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase
Putative esterase {ECO:0000313|EMBL:ABJ84047.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
SCNpilot_cont_300_bf_scaffold_2769_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20864..22012)
DNA (1149bp) protein (383aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ABJ05230.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABJ05230.1};; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alp
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07S54_RHOP5
Displaying 20 items

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