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SCNpilot_cont_300_bf_scaffold_2959

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2959_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2959_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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290..1246
DNA (957bp) protein (319aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
Acetaldehyde dehydrogenase 3 (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Sphingobium baderi LL03 RepID=T0FZF3_9SPHN
SCNpilot_cont_300_bf_scaffold_2959_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1248..2261
DNA (1014bp) protein (338aa)
4-hydroxy-2-oxovalerate aldolase 3 (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IZ31_9SPHN
SCNpilot_cont_300_bf_scaffold_2959_4
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2350..3210
DNA (861bp) protein (287aa)
IclR family transcriptional regulator n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IF63_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ54610.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2959_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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3215..4012
DNA (798bp) protein (266aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:ABQ90954.1}; EC=4.1.1.77 {ECO:0000313|EMBL:ABQ90954.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Ros
4-oxalocrotonate decarboxylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWF1_ROSS1 rbh
SCNpilot_cont_300_bf_scaffold_2959_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(4072..5385)
DNA (1314bp) protein (438aa)
Amino acid permease-associated region n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYQ4_EMTOG
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid permease
SCNpilot_cont_300_bf_scaffold_2959_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5531..6178
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037C5E9E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70536.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_cont_300_bf_scaffold_2959_8
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6175..6543)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003670636
Uncharacterized protein {ECO:0000313|EMBL:KGB58412.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
SCNpilot_cont_300_bf_scaffold_2959_9
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6867..7001
DNA (135bp) protein (45aa)
Myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWA8_9SPHN
Myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit {ECO:0000313|EMBL:KGB57912.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_cont_300_bf_scaffold_2959_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6998..8293
DNA (1296bp) protein (432aa)
Myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWA8_9SPHN rbh
myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit
SCNpilot_cont_300_bf_scaffold_2959_11
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8343..9530)
DNA (1188bp) protein (396aa)
acyl-CoA dehydrogenase n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000361F0DE
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADP69980.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" s
SCNpilot_cont_300_bf_scaffold_2959_12
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9598..10623
DNA (1026bp) protein (342aa)
oxidoreductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F08F0A rbh
L-arabinose 1-dehydrogenase {ECO:0000313|EMBL:ERK15728.1}; TaxID=1332071 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fon
ydgJ; oxidoreductase
SCNpilot_cont_300_bf_scaffold_2959_13
unknown

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comp(10617..10916)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2959_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10994..12589)
DNA (1596bp) protein (532aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILB2_METNO
BetA protein {ECO:0000313|EMBL:BAQ47142.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
glucose-methanol-choline oxidoreductase
SCNpilot_cont_300_bf_scaffold_2959_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12742..13164
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJM5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64895.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_2959_16
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13161..14750
DNA (1590bp) protein (530aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=46429 species="Bacteria; Proteob
malate synthase G (EC:2.3.3.9)
Malate synthase G n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYU7_SPHCR
Displaying 16 items

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