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SCNpilot_cont_300_bf_scaffold_5372

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5372_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..955)
DNA (954bp) protein (318aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037B0041
ATP-dependent Clp protease ATP-binding protein ClpA
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:ABZ72263.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.
SCNpilot_cont_300_bf_scaffold_5372_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(927..1283)
DNA (357bp) protein (119aa)
ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=CLPS_CAUCR
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000255|HAMAP-Rule:MF_00302}; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
SCNpilot_cont_300_bf_scaffold_5372_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1842..2828
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPI0_SPHYA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP71305.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_5372_4
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2855..3883
DNA (1029bp) protein (343aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EAT07179.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EAT07179.1};; TaxID=314266 species="Bacteria; Proteobacteria; Alphapr
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14) rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N887_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_5372_5
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3886..4398
DNA (513bp) protein (171aa)
flavin reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAE5
Flavin reductase {ECO:0000313|EMBL:EHI12703.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 1952
oxidoreductase
SCNpilot_cont_300_bf_scaffold_5372_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4406..5641)
DNA (1236bp) protein (412aa)
dinP; DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
DNA polymerase IV n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R948_PHEZH rbh
dinP; DNA polymerase IV
SCNpilot_cont_300_bf_scaffold_5372_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5638..6543)
DNA (906bp) protein (302aa)
ROK family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VL74_CAUST rbh
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADG11247.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (str
SCNpilot_cont_300_bf_scaffold_5372_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6673..7038
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0I0_CAUSK
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABZ70626.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulob
SCNpilot_cont_300_bf_scaffold_5372_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7045..8409
DNA (1365bp) protein (455aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Caulobacter sp. AP07 RepID=J2G9M9_9CAUL rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL26485.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacte
response regulator receiver modulated diguanylate cyclase rbh
SCNpilot_cont_300_bf_scaffold_5372_10
unknown

Not on your lists

8406..8729
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5372_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8828..8995)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RL33_PHEZH
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_5372_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9078..9521)
DNA (444bp) protein (148aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=450851 species="Bacteria; Proteobacteria; Alph
Ribonuclease R n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R959_PHEZH
exoribonuclease, VacB and RNase II family
SCNpilot_cont_300_bf_scaffold_5372_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9518..10192)
DNA (675bp) protein (225aa)
exoribonuclease, VacB and RNase II family; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZL3_CAUCN
Displaying 13 items

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