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SCNpilot_cont_300_bf_scaffold_1229_16

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(16124..17305)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESE7_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 329.0
  • Bit_score: 398
  • Evalue 8.20e-108
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29064.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 330.0
  • Bit_score: 399
  • Evalue 6.80e-108
hemolysin D similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 417.0
  • Bit_score: 381
  • Evalue 2.30e-103

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGAAGATGCTCCCCGTCGGCGGCGCCCGAGCCGCCGCCCATGCCTCGCGTATCGCCGCGCTGCTATTGACCGTCTCGCTTGCGGCTTGCGGTGGAGGTGAGAAGAAACCGGCCGCCAGGGCGCCGACCGAGGTCGGCTACGTCGTCGTCCANNNNNNNNNTGGGGTGATCCAGAAGCTGCTGTTCAAGGAGGGCTCGGTGGTGCGCGCCGGCCAGCCGCTCTATCAGATCGACCCCAGCCTCTATCGCGCCGCGGCCGGTCAGGCCGAAGCCAACCTCGCCAGCGCCCAGGCCAACCAGGCCGCCGCCGACGCCCTCGCCTCCCGCTACAAACCCCTCGCCGACATCCAGGCGGTCAGCGCCCAGGACTATACCAATGCCGTCGCCTCGGCCCGACAGGCGGCCGCCAGCGTCGGCCAGGCCCGCGCCGCCCTCGACACGGCCAACATCAATCTGCGCTTCACCACCGTCCCCGCCCCGATCAGCGGCCGCGTGGGGCGCACCCTGTTCACGGTCGGCGCCCTGGTCACCTCGAACCAGATCGGCCCGCTGACCACCATCCAGCGGCTCGATCCGATCTACATCGATGTTCAGCAGTCATCGGCCGACCTCACCCGCCTGCGGCGTCAGCTGGCGGCGGGCGGCGTTCAGGCCACCAGCGCCCCAGTGCAGATTTTGCTGGAGGACGGCAGCGTCTATGCCCATTCCGGCACGCTGGAGCTTTCGGAAGTGGTCGTCGATCCGACCACCGGCACGGTCGCCCTGCGCGTCCGCGTGCCGAACCCGGAAGGTCTGATCCTCCCCGGCATGTTCCTGCGCGCGCGCCTGGCCCAGGCCACCACGACCCAGGCCTACCTGGTGCCACAAGGCGCTCTCTCACGAGACGCCACGGGCGAAGGGACCGTCACGGTCGTGAAGGCCGACGGCGGCACGGCGACCAAGGTTGTCACCGCCGACCGCAATCAGGGCGACAACTGGGTAGTCACCTCCGGCCTGGCGCCTGGCGACCGCGTGGTCACCGAGGGTCTGGGCAATCTGCGGCCGGGCGCCAAGGTCCGCGCCGTGCCGGCCGGCTCGCCGCAGCACGTCACCGCGCGAAAGCCCGGTGAGCGAGGGGGCGGAGGCCAGGGCGGCGGCGGGGCGGCTCACGCCAAGCGTCGCGGCGAGGCGACCGCGTCATGA
PROTEIN sequence
Length: 394
MKMLPVGGARAAAHASRIAALLLTVSLAACGGGEKKPAARAPTEVGYVVVXXXXGVIQKLLFKEGSVVRAGQPLYQIDPSLYRAAAGQAEANLASAQANQAAADALASRYKPLADIQAVSAQDYTNAVASARQAAASVGQARAALDTANINLRFTTVPAPISGRVGRTLFTVGALVTSNQIGPLTTIQRLDPIYIDVQQSSADLTRLRRQLAAGGVQATSAPVQILLEDGSVYAHSGTLELSEVVVDPTTGTVALRVRVPNPEGLILPGMFLRARLAQATTTQAYLVPQGALSRDATGEGTVTVVKADGGTATKVVTADRNQGDNWVVTSGLAPGDRVVTEGLGNLRPGAKVRAVPAGSPQHVTARKPGERGGGGQGGGGAAHAKRRGEATAS*