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SCNpilot_cont_300_bf_scaffold_1229

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1229_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..889
DNA (888bp) protein (296aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VG26_CAUST
SCNpilot_cont_300_bf_scaffold_1229_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(886..2361)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY6_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK91626.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_3
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2479..2715
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VG49_CAUST
Uncharacterized protein {ECO:0000313|EMBL:ADG10052.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2910..3788
DNA (879bp) protein (293aa)
Phosphate binding protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHF9_RHIRD
pstS; phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
pstS; phosphate ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1229_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3812..4702
DNA (891bp) protein (297aa)
Phosphate transport system permease protein PstC n=2 Tax=Agrobacterium RepID=I6QN01_9RHIZ
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phosphate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1229_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4702..5643
DNA (942bp) protein (314aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHG1_RHIRD
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phosphate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1229_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5695..6468
DNA (774bp) protein (258aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate import ATP-binding protein PstB n=2 Tax=Alcaligenes faecalis RepID=PSTB_ALCFA
phosphate ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_1229_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6508..7674)
DNA (1167bp) protein (389aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCD0_NOVAD
Signal transduction histidine kinase {ECO:0000313|EMBL:GAO53972.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
periplasmic sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1229_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8424)
DNA (609bp) protein (203aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Glutathione S-transferase domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLY9_BRESC
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_1229_10
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8538..9284
DNA (747bp) protein (249aa)
Transcriptional regulator n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLZ0_BRESC rbh
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_1229_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9316..9723
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5W6_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67682.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_cont_300_bf_scaffold_1229_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9713..10573)
DNA (861bp) protein (287aa)
Bacterial regulatory helix-turn-helix protein, lysR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2C5_BREDI
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EGF95187.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1229_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11243..11527
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H227_CAUCN
alpha/beta hydrolase family protein
Uncharacterized protein {ECO:0000313|EMBL:AAK22843.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
SCNpilot_cont_300_bf_scaffold_1229_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11524..12927)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G9J7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53442.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
transporter
SCNpilot_cont_300_bf_scaffold_1229_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12927..16127)
DNA (3201bp) protein (1067aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5R7_CAUCE
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:ENZ83906.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Cauloba
multidrug transporter
SCNpilot_cont_300_bf_scaffold_1229_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16124..17305)
DNA (1182bp) protein (394aa)
RND family efflux transporter, MFP subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESE7_CAUCE
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29064.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hemolysin D
SCNpilot_cont_300_bf_scaffold_1229_17
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17590..18342
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037D05D6
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70817.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_18
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18775..20151
DNA (1377bp) protein (459aa)
cell division protein Fic n=1 Tax=Methylocystis parvus RepID=UPI00035C90AF rbh
filamentation induced by camp protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADU13736.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source
SCNpilot_cont_300_bf_scaffold_1229_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20256..20672)
DNA (417bp) protein (139aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae
Arsenate reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T5_PHEZH
arsC; arsenate reductase
SCNpilot_cont_300_bf_scaffold_1229_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20669..21781)
DNA (1113bp) protein (371aa)
Arsenite efflux pump n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T6_PHEZH rbh
arsenite efflux pump protein rbh
Arsenite efflux pump {ECO:0000313|EMBL:ACG77850.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium
SCNpilot_cont_300_bf_scaffold_1229_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..22137)
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T8_PHEZH
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACG77852.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
SCNpilot_cont_300_bf_scaffold_1229_22
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22200..22859)
DNA (660bp) protein (220aa)
Beta-lactamase domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QF81_BRESC
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADL00566.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimo
SCNpilot_cont_300_bf_scaffold_1229_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22925..23338)
DNA (414bp) protein (138aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Caulobacter sp. AP07 RepID=J2GWD7_9CAUL
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EJL34765.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; C
OsmC family protein
SCNpilot_cont_300_bf_scaffold_1229_24
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23401..23892)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VVD3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP51347.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_25
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23889..25121)
DNA (1233bp) protein (411aa)
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EEFBE8 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO54197.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
oxidase
SCNpilot_cont_300_bf_scaffold_1229_26
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25147..26304)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000382020D rbh
C4-dicarboxylate transporter/malic acid transport protein rbh
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ADL00562.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevund
SCNpilot_cont_300_bf_scaffold_1229_27
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26362..26859)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66AC5
Uncharacterized protein {ECO:0000313|EMBL:EZP51353.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_28
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27010..27894)
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QF78_BRESC rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADL00563.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="B
SCNpilot_cont_300_bf_scaffold_1229_29
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28029..28403
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXS70709.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
SCNpilot_cont_300_bf_scaffold_1229_30
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28400..29830
DNA (1431bp) protein (477aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LX87_METRJ rbh
hypothetical protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ACB27208.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteria
Displaying items 1-30 of 33 in total

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