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SCNpilot_cont_300_bf_scaffold_3956

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3956_1
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..101
DNA (99bp) protein (33aa)
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000364C019
Sugar ABC transporter permease {ECO:0000313|EMBL:KEP70547.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava da
ABC transporter, inner-membrane protein
SCNpilot_cont_300_bf_scaffold_3956_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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105..1193
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036864C2 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW59539.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodo
ABC transporter
SCNpilot_cont_300_bf_scaffold_3956_3
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1253..2008
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374B099 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYD77920.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
sugar phosphate isomerase/epimerase
SCNpilot_cont_300_bf_scaffold_3956_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2020..3111
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380D7E3
PUTATIVE OXIDOREDUCTASE PROTEIN {ECO:0000313|EMBL:CDP53566.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB0
oxidoreductase , NAD-binding Rossmann fold family protein
SCNpilot_cont_300_bf_scaffold_3956_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3172..4143)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003681809
Uncharacterized protein {ECO:0000313|EMBL:GAN77804.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera ru
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3956_6
unknown

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4299..4532
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3956_7
unknown

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4590..4835
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3956_8
unknown

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5002..5229
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3956_9
unknown

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5355..5477
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3956_10
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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5513..6532
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003657875
Uncharacterized protein {ECO:0000313|EMBL:KHF24345.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3956_11
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..6984)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F6797
SCNpilot_cont_300_bf_scaffold_3956_12
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6984..7487)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036352E3
SCNpilot_cont_300_bf_scaffold_3956_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7490..8155)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036362E2
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavame
Displaying 13 items

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