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SCNpilot_cont_300_bf_scaffold_6253

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6253_1
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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74..349
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380E0DC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFH35373.1}; TaxID=520453 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv.
SCNpilot_cont_300_bf_scaffold_6253_2
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(421..915)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380176E
UPF0173 metal-dependent hydrolase Q669_18660 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" so
metal-dependent hydrolase
SCNpilot_cont_300_bf_scaffold_6253_3

Not on your lists

1197..1817
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D11FE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09245.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6253_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1844..2365
DNA (522bp) protein (174aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=864069 specie
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D3EF2
endonuclease
SCNpilot_cont_300_bf_scaffold_6253_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2369..2902
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HWN9_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL46465.1}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (str
SCNpilot_cont_300_bf_scaffold_6253_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2881..4524)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379075C
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK55105.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alha
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_6253_7
unknown

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4755..5288
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6253_8
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5315..6367)
DNA (1053bp) protein (351aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=744980 species="Bacteria; Proteobacteria; Alph
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003607C29
rnr; exoribonuclease
SCNpilot_cont_300_bf_scaffold_6253_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6361..7596)
DNA (1236bp) protein (412aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=69279 species="Bacteria; Proteobacteria; Alpha
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003607C29
ribonuclease R
SCNpilot_cont_300_bf_scaffold_6253_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7785..10505)
DNA (2721bp) protein (907aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=78245 species="Bacteria; Proteobacte
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E8A19
DNA topoisomerase I
Displaying 10 items

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