ggKbase home page

SCNpilot_cont_300_bf_scaffold_1086

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1086_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..822)
DNA (822bp) protein (274aa)
UPI0003D04DF8 related cluster n=1 Tax=unknown RepID=UPI0003D04DF8
Uncharacterized protein {ECO:0000313|EMBL:EWY42604.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1086_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(842..1939)
DNA (1098bp) protein (366aa)
Alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PGN9_9RHIZ
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:EKF60073.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_300_bf_scaffold_1086_3
unknown

Not on your lists

2072..2260
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_4
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2312..2917
DNA (606bp) protein (202aa)
UPI0003CE4837 related cluster n=1 Tax=unknown RepID=UPI0003CE4837
RNA polymerase sigma factor, sigma-70 family
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:ESY86884.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
SCNpilot_cont_300_bf_scaffold_1086_5
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2977..3534)
DNA (558bp) protein (186aa)
UPI0003D03F65 related cluster n=1 Tax=unknown RepID=UPI0003D03F65
Membrane protein {ECO:0000313|EMBL:ESZ78407.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C1
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1086_6
unknown

Not on your lists

3663..3875
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3902..4219)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWR2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00736.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
SCNpilot_cont_300_bf_scaffold_1086_8
unknown

Not on your lists

4347..4874
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_9
unknown

Not on your lists

4894..5016
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_10
unknown

Not on your lists

5039..5179
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5210..5776)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1U1_9BURK
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV60989.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1086_12
unknown

Not on your lists

comp(5773..6006)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6098..6607
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXM6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35264.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1086_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6743..9070)
DNA (2328bp) protein (776aa)
Probable glucose dehydrogenase (Pyrroloquinoline-quinone) protein {ECO:0000313|EMBL:CAC45553.1}; EC=1.1.5.2 {ECO:0000313|EMBL:CAC45553.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteob
gdh; quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P3R6_RHIML
SCNpilot_cont_300_bf_scaffold_1086_15
unknown

Not on your lists

comp(9099..9236)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_16
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9354..11117
DNA (1764bp) protein (588aa)
pyruvate oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C453B rbh
Pyruvate oxidase {ECO:0000313|EMBL:ESY20308.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC39
thiamine pyrophosphate protein domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_1086_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11183..12007)
DNA (825bp) protein (275aa)
Catalase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV8_9RHIZ
Catalase {ECO:0000313|EMBL:EKF60701.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobac
catalase
SCNpilot_cont_300_bf_scaffold_1086_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12276..15278
DNA (3003bp) protein (1001aa)
Sensory box protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTV7_9SPHN rbh
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13393.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
sensor histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_1086_19
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15271..15642
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DDI2_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EJT00966.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_1086_20
unknown

Not on your lists

15725..15901
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1086_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15898..16488
DNA (591bp) protein (197aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ENB6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP73152.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_1086_22
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16497..17117
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037522AA
Nicotinamidase-like amidase {ECO:0000313|EMBL:EIM28347.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga loton
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_1086_23
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17204..17998
DNA (795bp) protein (265aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ1_PELHB
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:AEQ51639.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" sourc
SCNpilot_cont_300_bf_scaffold_1086_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18146..19234
DNA (1089bp) protein (363aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W3Q4_RHILT
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:EJC80351.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
ABC transporter substrate-binding protein
Displaying 24 items

View Taxonomy