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SCNpilot_cont_300_bf_scaffold_1278

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1278_1
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(500..943)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03499.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1084..1251)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VTK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEG10426.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1470..2141)
DNA (672bp) protein (224aa)
RES domain-containing protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0K1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:CEG10427.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2138..3061)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z969_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI99151.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
SCNpilot_cont_300_bf_scaffold_1278_5
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3375..4412)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRQ0_9RHIZ
DNA primase {ECO:0000313|EMBL:KGJ18048.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4412..8734)
DNA (4323bp) protein (1441aa)
Phospholipid N-methyltransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ9_9RHIZ rbh
Methylase {ECO:0000313|EMBL:KEQ52210.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
putative methylase/helicase
SCNpilot_cont_300_bf_scaffold_1278_7
unknown

Not on your lists

comp(9139..9366)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1278_8
Serratia multitudinisentens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9553..11685
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZ98_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG20695.1}; TaxID=1441930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia multitu
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1278_9
unknown

Not on your lists

comp(11879..12052)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1278_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12147..12365)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VEV7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ52203.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_11
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12425..14563)
DNA (2139bp) protein (713aa)
UPI0003D6575A related cluster n=1 Tax=unknown RepID=UPI0003D6575A
Plasmid partitioning protein ParB {ECO:0000313|EMBL:ETI60080.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphin
ParB-like protein
SCNpilot_cont_300_bf_scaffold_1278_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14676..15872)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003628CEB
Uncharacterized protein {ECO:0000313|EMBL:KEZ18644.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16058..16321)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52814.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16684..16986
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAG5_9RHIZ
ribbon-helix-helix domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CCV13208.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_1278_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17014..17502
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F9Q9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13210.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
GCN5-related N-acetyltransferase protein
SCNpilot_cont_300_bf_scaffold_1278_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17521..18804
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4D3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52813.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18801..20825
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4D2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52812.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ATPase-like protein
SCNpilot_cont_300_bf_scaffold_1278_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20825..21718
DNA (894bp) protein (298aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4D1_9BRAD rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EFI52811.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
DNA polymerase III subunit epsilon
SCNpilot_cont_300_bf_scaffold_1278_19

Not on your lists

21847..23187
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SD32_THISK
Uncharacterized protein {ECO:0000313|EMBL:KKL84261.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23618..24625
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMI1_XANP2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69224.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
SCNpilot_cont_300_bf_scaffold_1278_21
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24658..25983
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U1X4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD81808.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
SCNpilot_cont_300_bf_scaffold_1278_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26168..27409)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=G7DNV6_BRAJP
site-specific integrase/recombinase
Putative Prophage CP4-57 integrase {ECO:0000313|EMBL:KGJ64387.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
SCNpilot_cont_300_bf_scaffold_1278_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27593..27925)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036FC2AB
DNA repair protein RadC {ECO:0000313|EMBL:KFC67608.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
radC; DNA repair protein RadC
SCNpilot_cont_300_bf_scaffold_1278_24

Not on your lists

28240..28920
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG8L7 RepID=B3TB72_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ09831.1}; TaxID=455556 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8L7.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1278_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29075..29833
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380DF76
CinA-like protein
CinA-like protein {ECO:0000313|EMBL:ADZ70051.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003
SCNpilot_cont_300_bf_scaffold_1278_26
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29977..30342
DNA (366bp) protein (122aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine pho
xanthine phosphoribosyltransferase n=1 Tax=Kaistia granuli RepID=UPI000368B80E
phosphoribosyl transferase domain-containing protein
Displaying 26 items

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