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SCNpilot_cont_300_bf_scaffold_2508

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2508_1
unknown

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1..561
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2508_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(539..1174)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A8812
Ribokinase {ECO:0000313|EMBL:KFL25455.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ribokinase
SCNpilot_cont_300_bf_scaffold_2508_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1570..3621
DNA (2052bp) protein (684aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BD3CC
Peptidase M3 {ECO:0000313|EMBL:KGM31912.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_300_bf_scaffold_2508_4
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3638..3781
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376BFB5
SCNpilot_cont_300_bf_scaffold_2508_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3822..6278)
DNA (2457bp) protein (819aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=653930 species="Bacteria; Pr
DNA gyrase subunit B n=1 Tax=Kaistia granuli RepID=UPI0003654F70
gyrB; DNA gyrase subunit B
SCNpilot_cont_300_bf_scaffold_2508_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6510..7115
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003736B44
DedA family protein 1
DedA family protein 1 {ECO:0000313|EMBL:ADP15184.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosox
SCNpilot_cont_300_bf_scaffold_2508_7
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7112..8056)
DNA (945bp) protein (315aa)
Ribonuclease BN n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WJ19_9FLAO
Ribonuclease BN {ECO:0000313|EMBL:EMY80256.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis
ribonuclease BN
SCNpilot_cont_300_bf_scaffold_2508_8
unknown

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comp(8130..8459)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2508_9

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comp(8548..9579)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375BA93
Periplasmic binding protein-like domain protein {ECO:0000313|EMBL:AIA16984.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thuR; transcriptional regulator LacI family
SCNpilot_cont_300_bf_scaffold_2508_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9797..10819
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003630180 rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:CDX29996.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2508_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10862..11797
DNA (936bp) protein (312aa)
sugar phosphate isomerase n=1 Tax=Kaistia granuli RepID=UPI00036A4D6F
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CDX13126.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
xylose isomerase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2508_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11817..13037
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036285A3 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33363.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source
putative sugar uptake ABC transporter periplasmic solute-binding protein precursor
SCNpilot_cont_300_bf_scaffold_2508_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13150..14052
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035D7773
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM33794.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinu
maltose ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_2508_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14064..14876
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A2C29
ABC transporter permease {ECO:0000313|EMBL:KGM33786.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limo
putative permease component of ABC transporter
SCNpilot_cont_300_bf_scaffold_2508_15
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14845..15411)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C1AE5
Putative lipoprotein {ECO:0000313|EMBL:EFL89583.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2508_16
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15482..15811)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B0499
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ABS61813.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Par
SCNpilot_cont_300_bf_scaffold_2508_17
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16005..16514)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003693D47
yfiA; Sigma 54 modulation protein/ribosomal protein S30EA
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ADZ72352.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strai
SCNpilot_cont_300_bf_scaffold_2508_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16810..18363)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378CB9A
RNA polymerase sigma-54 subunit RpoN
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novell
Displaying 18 items

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