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SCNpilot_cont_300_bf_scaffold_2524

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2524_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E2DA0
Uncharacterized protein {ECO:0000313|EMBL:KGM32905.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source
oxidoreductase
SCNpilot_cont_300_bf_scaffold_2524_2
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(563..1213)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EE583
Uncharacterized protein {ECO:0000313|EMBL:KCZ55382.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringen
SM-20-related protein
SCNpilot_cont_300_bf_scaffold_2524_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1210..1875)
DNA (666bp) protein (222aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000255|HAMAP-Rule:MF_014
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003692AD7
SCNpilot_cont_300_bf_scaffold_2524_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1909..2208)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003730D54
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91720.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain
SCNpilot_cont_300_bf_scaffold_2524_5
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..3428)
DNA (1017bp) protein (339aa)
Zinc-containing alcohol dehydrogenase superfamily n=2 Tax=Burkholderia multivorans RepID=B9BUI0_9BURK
Zinc-containing alcohol dehydrogenase superfamily {ECO:0000313|EMBL:EEE05477.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Bu
dehydrogenase
SCNpilot_cont_300_bf_scaffold_2524_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3453..3848)
DNA (396bp) protein (132aa)
UPI0003CDED73 related cluster n=1 Tax=unknown RepID=UPI0003CDED73
Uncharacterized protein {ECO:0000313|EMBL:CDX16813.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2524_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3862..4332)
DNA (471bp) protein (157aa)
UPI0003CF52CA related cluster n=1 Tax=unknown RepID=UPI0003CF52CA
MFS transporter {ECO:0000313|EMBL:KKB84401.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2524_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4445..5389
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QED1_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB12799.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
ycjZ; Hypothetical transcriptional regulator YcjZ
SCNpilot_cont_300_bf_scaffold_2524_9
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5364..6926)
DNA (1563bp) protein (521aa)
diguanylate cyclase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000382D39D
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:KAK44962.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsue
SCNpilot_cont_300_bf_scaffold_2524_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7056..7895)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHN0_MESOW rbh
Beta-lactamase {ECO:0000313|EMBL:KGM35354.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2524_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7906..10317)
DNA (2412bp) protein (804aa)
Putative ribose/galactose/methyl galactoside import ATP-binding protein 1 {ECO:0000313|EMBL:CCV08294.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CCV08294.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Al
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000379000A rbh
ABC transporter rbh
SCNpilot_cont_300_bf_scaffold_2524_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10336..11256)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000377D03E rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31109.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;"
sugar ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2524_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11783..12388
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003810162 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM31110.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="In
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2524_14
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12446..13294)
DNA (849bp) protein (283aa)
isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI000374937F
Xylose isomerase {ECO:0000313|EMBL:EJT02507.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
xylose isomerase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2524_15
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(13321..13518)
DNA (198bp) protein (66aa)
xylose isomerase Tax=CG_Elusi_02
Displaying 15 items

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