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SCNpilot_cont_300_bf_scaffold_2930

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2930_1
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..460
DNA (459bp) protein (153aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=Kaistia granuli RepID=UPI000380DF88
2-isopropylmalate synthase
SCNpilot_cont_300_bf_scaffold_2930_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(544..1491)
DNA (948bp) protein (316aa)
alkaline phosphatase n=1 Tax=Kaistia granuli RepID=UPI00035C4072
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89411.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
SCNpilot_cont_300_bf_scaffold_2930_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1680..2603)
DNA (924bp) protein (308aa)
alkaline phosphatase n=1 Tax=Kaistia granuli RepID=UPI00035C4072
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89411.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
SCNpilot_cont_300_bf_scaffold_2930_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3107..3565
DNA (459bp) protein (153aa)
Excisionase/Xis, DNA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Y39_RHOPB
excisionase/Xis, DNA-binding
Excisionase/Xis, DNA-binding {ECO:0000313|EMBL:ABD89947.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
SCNpilot_cont_300_bf_scaffold_2930_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3569..4159
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4H4_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ69474.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_cont_300_bf_scaffold_2930_6
unknown

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4497..4634
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2930_7
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4637..5053
DNA (417bp) protein (139aa)
aldehyde-activating protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003AA1C99
Aldehyde-activating protein {ECO:0000313|EMBL:ESY85034.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2930_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5060..5974)
DNA (915bp) protein (305aa)
esterase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A9108 rbh
esterase rbh
Putative metal-dependent hydrolase with the TIM-barrel fold {ECO:0000313|EMBL:EJC67116.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agr
SCNpilot_cont_300_bf_scaffold_2930_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6214..6906
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000368EF8E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86413.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
SCNpilot_cont_300_bf_scaffold_2930_10
unknown

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comp(6988..7860)
DNA (873bp) protein (291aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2930_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8702..9781
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4Q8_STAND rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH87956.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
SCNpilot_cont_300_bf_scaffold_2930_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10045..10746
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037428C2
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM30604.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="In
ABC-type sugar transport system, periplasmic component
Displaying 12 items

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