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SCNpilot_cont_300_bf_scaffold_28271

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_28271_1
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1342
DNA (1341bp) protein (447aa)
DNA polymerase III, subunits gamma and tau, putative {ECO:0000313|EMBL:EEE43267.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEE43267.1};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037280BF
dnaX; DNA polymerase III subunits gamma and tau
SCNpilot_cont_300_bf_scaffold_28271_2
bacterium YEK0313, Bacteria

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1378..1647
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362D20E
Nucleoid-associated protein BN1110_06171 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
DNA-binding protein, YbaB/EbfC family
SCNpilot_cont_300_bf_scaffold_28271_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1921..2526
DNA (606bp) protein (202aa)
recombinase RecR n=1 Tax=Kaistia granuli RepID=UPI00035F0F75
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitr
recR; recombination protein RecR
SCNpilot_cont_300_bf_scaffold_28271_4
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2544..3065
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DDE2E
Putative transmembrane protein {ECO:0000313|EMBL:EKV26994.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caeni
transmembrane protein
SCNpilot_cont_300_bf_scaffold_28271_5
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3059..3478)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002F4CC7F
Uncharacterized protein {ECO:0000313|EMBL:EAQ28824.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_28271_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3483..4550)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037EBEEC
DNA recombination protein RmuC {ECO:0000313|EMBL:ESR26989.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratan
DNA recombination protein RmuC
SCNpilot_cont_300_bf_scaffold_28271_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4724..5167
DNA (444bp) protein (148aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase (EC:3.5.1.88)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003617F34
SCNpilot_cont_300_bf_scaffold_28271_8
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5269..6075
DNA (807bp) protein (269aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=224914 species="B
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EF39E
methionyl-tRNA formyltransferase
SCNpilot_cont_300_bf_scaffold_28271_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6075..6863
DNA (789bp) protein (263aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369B596 rbh
Displaying 9 items

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