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SCNpilot_cont_300_bf_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_480_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28..987)
DNA (960bp) protein (320aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FBBA46
SCNpilot_cont_300_bf_scaffold_480_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1281..3011)
DNA (1731bp) protein (577aa)
cell division protein FtsZ n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003640547 rbh
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Meth
SCNpilot_cont_300_bf_scaffold_480_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3098..4423)
DNA (1326bp) protein (442aa)
Cell division protein ftsA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVH3_9RHIZ
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga loto
cell division protein FtsA
SCNpilot_cont_300_bf_scaffold_480_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4420..5349)
DNA (930bp) protein (310aa)
Cell division protein FtsQ n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVH2_9RHIZ
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Micr
polypeptide transporter
SCNpilot_cont_300_bf_scaffold_480_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5316..6230)
DNA (915bp) protein (305aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302ED27 rbh
SCNpilot_cont_300_bf_scaffold_480_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7253)
DNA (945bp) protein (315aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QPB2_9BRAD
SCNpilot_cont_300_bf_scaffold_480_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7250..8647)
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramoyl-L-alanine synthetase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D2A4B9 rbh
SCNpilot_cont_300_bf_scaffold_480_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8651..9772)
DNA (1122bp) protein (374aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031DEDBB rbh
SCNpilot_cont_300_bf_scaffold_480_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9769..10926)
DNA (1158bp) protein (386aa)
Bacterial cell division membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG7_9RHIZ
Bacterial cell division membrane protein {ECO:0000313|EMBL:EIM27959.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microv
cell cycle protein
SCNpilot_cont_300_bf_scaffold_480_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10937..12355)
DNA (1419bp) protein (473aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG6_9RHIZ
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
SCNpilot_cont_300_bf_scaffold_480_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..13445)
DNA (1086bp) protein (362aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG5_9RHIZ rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
SCNpilot_cont_300_bf_scaffold_480_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13455..14873)
DNA (1419bp) protein (473aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobac
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLS0_RHOPX
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
SCNpilot_cont_300_bf_scaffold_480_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14870..16309)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035C7168
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
SCNpilot_cont_300_bf_scaffold_480_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16306..18054)
DNA (1749bp) protein (583aa)
penicillin-binding protein transpeptidase (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG2_9RHIZ
Penicillin-binding protein {ECO:0000313|EMBL:KFG69130.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerila
SCNpilot_cont_300_bf_scaffold_480_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18062..18469)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMX1_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL60314.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
SCNpilot_cont_300_bf_scaffold_480_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18466..19512)
DNA (1047bp) protein (349aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG0_9RHIZ rbh
mraW; S-adenosyl-methyltransferase MraW
SCNpilot_cont_300_bf_scaffold_480_17

Not on your lists

comp(19509..19979)
DNA (471bp) protein (157aa)
Protein MraZ n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=MRAZ_BEII9
Marine sediment metagenome DNA, contig: S01H1_L07337 {ECO:0000313|EMBL:GAF70681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
SCNpilot_cont_300_bf_scaffold_480_18
bacterium YEK0313, Bacteria

Not on your lists

comp(20342..21217)
DNA (876bp) protein (292aa)
Ferric reductase domain-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X0S7_9RHIZ
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000313|EMBL:CEJ15212.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Ferric reductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_480_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21387..21668)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1Z6_9RHIZ
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ48580.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
hypothetical protein
SCNpilot_cont_300_bf_scaffold_480_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22015..22581
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035EDEA8
Putative transglycosylase {ECO:0000313|EMBL:KFC73828.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
lytic transglycosylase
SCNpilot_cont_300_bf_scaffold_480_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23027..23785
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003618816
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_480_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23821..24852)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D944B8
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:KFC74162.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; B
patatin
SCNpilot_cont_300_bf_scaffold_480_23
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24837..25622)
DNA (786bp) protein (262aa)
D-beta-hydroxybutyrate dehydrogenase (BDH) (3-hydroxybutyrate dehydrogenase) (3-HBDH) {ECO:0000313|EMBL:CCE07604.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CCE07604.1};; TaxID=551947 species="Bacteria; Proteob
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11C54
D-beta-hydroxybutyrate dehydrogenase
SCNpilot_cont_300_bf_scaffold_480_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26046..26936
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E99EA7
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC73945.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_480_25
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27190..28146)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000382322B
Putative sulfite oxidase subunit YedY {ECO:0000313|EMBL:EJW10402.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod
putative sulfite oxidase subunit YedY
SCNpilot_cont_300_bf_scaffold_480_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28313..28795
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00027D7F31
MarR family transcriptional regulator protein
MarR family transcriptional regulator protein {ECO:0000313|EMBL:AIC28711.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_cont_300_bf_scaffold_480_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28788..30029
DNA (1242bp) protein (414aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI0003744CDA
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDX46401.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
multidrug resistance efflux pump
SCNpilot_cont_300_bf_scaffold_480_28
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30033..31571
DNA (1539bp) protein (513aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LTJ4_9PROT
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EKF08267.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.
emrB; multidrug resistance transporter EmrB
SCNpilot_cont_300_bf_scaffold_480_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31798..33501)
DNA (1704bp) protein (568aa)
Acyl-CoA synthetase {ECO:0000313|EMBL:KFC73985.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFC73985.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E0BF77
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_480_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33591..35654)
DNA (2064bp) protein (688aa)
Translation elongation factor-like GTPase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPM6_9RHIZ
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:KFC73986.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
elongation factor G
Displaying items 1-30 of 120 in total

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