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SCNpilot_cont_300_bf_scaffold_2566

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2566_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..544
DNA (543bp) protein (181aa)
PEP motif putative anchor domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJB6_NITSI
PEP motif anchor domain-containing protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:AEJ01623.1}; Flags: Precursor;; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitr
SCNpilot_cont_300_bf_scaffold_2566_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(664..1533)
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
dTDP-L-rhamnose biosynthesis protein n=1 Tax=Sphingomonas sanxanigenens RepID=U6BP47_9SPHN rbh
glucose-1-phosphate thymidylyltransferase
SCNpilot_cont_300_bf_scaffold_2566_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1830..2393
DNA (564bp) protein (188aa)
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49590.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
SCNpilot_cont_300_bf_scaffold_2566_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..3528
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EAT3_BRASB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2566_5
unknown

Not on your lists

3567..3953
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2566_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..5035
DNA (1104bp) protein (368aa)
glycosyl transferase family protein (EC:2.7.8.6)
Probable glycosyl transferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2K6_9BRAD rbh
Probable glycosyl transferase {ECO:0000313|EMBL:EAQ33530.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp.
SCNpilot_cont_300_bf_scaffold_2566_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5103..5861
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X193_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49602.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2566_8
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6055..6684)
DNA (630bp) protein (210aa)
PEP motif putative anchor domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJB6_NITSI
PEP motif anchor domain-containing protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:AEJ01623.1}; Flags: Precursor;; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitr
SCNpilot_cont_300_bf_scaffold_2566_9
unknown

Not on your lists

7270..7464
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2566_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7581..7898)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000319824A
Uncharacterized protein {ECO:0000313|EMBL:KGE02226.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2566_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7910..9208)
DNA (1299bp) protein (433aa)
TRAP transporter, DctM subunit n=1 Tax=Polaromonas sp. CF318 RepID=J2L6A4_9BURK rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EJL80743.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas s
TRAP dicarboxylate transporter subunit DctM
SCNpilot_cont_300_bf_scaffold_2566_12

Not on your lists

comp(9222..9743)
DNA (522bp) protein (174aa)
Tripartite ATP-independent periplasmic transporter, DctQ component (Fragment) n=1 Tax=uncultured organism RepID=T1W7G1_9ZZZZ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:AGU10621.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncul
tripartite ATP-independent periplasmic transporter DctQ
SCNpilot_cont_300_bf_scaffold_2566_13

Not on your lists

comp(9753..10730)
DNA (978bp) protein (326aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=uncultured organism RepID=T1W8Z8_9ZZZZ
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:AGU10620.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
TRAP dicarboxylate transporter subunit DctP
SCNpilot_cont_300_bf_scaffold_2566_14
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10746..11729)
DNA (984bp) protein (328aa)
UDP-glucose 4-epimerase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UDT1_9BURK rbh
UDP-glucose 4-epimerase rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AHB75489.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.
SCNpilot_cont_300_bf_scaffold_2566_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12262)
DNA (564bp) protein (188aa)
glucose-1-dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000370FEC6
Uncharacterized protein {ECO:0000313|EMBL:KHQ95712.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative oxidoreductase, SDR family
SCNpilot_cont_300_bf_scaffold_2566_16
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12361..13257)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E04206 rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:EYS84951.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus s
fumarylacetoacetate hydrolase
SCNpilot_cont_300_bf_scaffold_2566_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13380..14072
DNA (693bp) protein (231aa)
GntR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SHY2_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:EHP37907.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2566_18
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14129..14551)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AGA2_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE56529.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2566_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14651..15520)
DNA (870bp) protein (290aa)
short-chain dehydrogenase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D32A0 rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAD50764.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_cont_300_bf_scaffold_2566_20
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15538..15981)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D2A9A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70113.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_cont_300_bf_scaffold_2566_21
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15978..16853)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CE3DF rbh
NAD-dependent epimerase/dehydratase
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CBH49358.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (st
SCNpilot_cont_300_bf_scaffold_2566_22
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16952..17755)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F0D79 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB02585.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
short chain dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_2566_23
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17891..19492
DNA (1602bp) protein (534aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003758DF5 rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EDT01817.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cep
SCNpilot_cont_300_bf_scaffold_2566_24
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19514..20329)
DNA (816bp) protein (272aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EE6
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AGH48693.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_2566_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20337..20939)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003620A04 rbh
phenylacetic acid degradation protein PaaY
Phenylacetic acid degradation protein PaaY {ECO:0000313|EMBL:AGH48692.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
SCNpilot_cont_300_bf_scaffold_2566_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20939..22090)
DNA (1152bp) protein (384aa)
Acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCG0_SPHWW rbh
acetyl-CoA acetyltransferase rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABQ69976.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
SCNpilot_cont_300_bf_scaffold_2566_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22083..23147)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DF826 rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAD47905.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2566_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23153..24151)
DNA (999bp) protein (333aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000381244C rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71223.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_2566_29
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24169..25149)
DNA (981bp) protein (327aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC8967 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EQB13572.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
SCNpilot_cont_300_bf_scaffold_2566_30
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25218..25385)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E94AF
Displaying 30 items

View Taxonomy