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SCNpilot_cont_300_bf_scaffold_6887

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6887_1
bacterium YEK0313, Bacteria

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comp(3..635)
DNA (633bp) protein (211aa)
Outer membrane autotransporter barrel n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133V4_RHOPS
Extracellular serine protease {ECO:0000313|EMBL:CEJ10528.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
outer membrane autotransporter barrel domain-containing protein
SCNpilot_cont_300_bf_scaffold_6887_2
unknown

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comp(590..1297)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6887_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1465..1743
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z3Z7_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
conserved exported hypothetical protein
SCNpilot_cont_300_bf_scaffold_6887_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1784..2647)
DNA (864bp) protein (288aa)
2-hydroxyacid dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5J5_9PROT
2-hydroxyacid dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2-hydroxyacid dehydrogenase
SCNpilot_cont_300_bf_scaffold_6887_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2680..3660)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000364682A
TRAP transporter solute receptor, TAXI family; K07080 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TRAP transporter solute receptor, TAXI family
SCNpilot_cont_300_bf_scaffold_6887_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3781..4917)
DNA (1137bp) protein (379aa)
Nickel import ATP-binding protein NikD, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R017_9RHOB
oligopeptide ABC transporter, ATP-binding components Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oligopeptide ABC transporter, ATP-binding components
SCNpilot_cont_300_bf_scaffold_6887_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5338..6357)
DNA (1020bp) protein (340aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K624_9PROT rbh
ABC transporter permease Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_6887_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6357..7454)
DNA (1098bp) protein (366aa)
Oligopeptide ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8D2_AZOL4 rbh
oligopeptide ABC transporter permease; K13894 microcin C transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
microcin ABC transporter permease
SCNpilot_cont_300_bf_scaffold_6887_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7499..9106)
DNA (1608bp) protein (536aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Beggiatoa alba B18LD RepID=I3CGS1_9GAMM rbh
oligopeptide ABC transporter, periplasmic component; K13893 microcin C transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oligopeptide ABC transporter, periplasmic component
SCNpilot_cont_300_bf_scaffold_6887_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9416..10390)
DNA (975bp) protein (325aa)
Uncharacterized protein UPF0065 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBN4_ACISJ
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM43659.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
SCNpilot_cont_300_bf_scaffold_6887_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10503..11033
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TG16_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05404.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6887_12
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11052..11429
DNA (378bp) protein (126aa)
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PHY3_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78611.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_6887_13
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11464..11874
DNA (411bp) protein (137aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W3G7_9BRAD
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJN13192.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
hypothetical protein
Displaying 13 items

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