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SCNpilot_cont_300_bf_scaffold_1006

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1006_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..810)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7F8_BRAJP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..1319)
DNA (162bp) protein (54aa)
DNA repair protein RadC n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TEZ2_PHAFV
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
DNA repair protein RadC
SCNpilot_cont_300_bf_scaffold_1006_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1566..2417)
DNA (852bp) protein (284aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVJ8_9BRAD rbh
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EIG63804.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2512..2835)
DNA (324bp) protein (108aa)
DNA repair protein RadC n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TEZ2_PHAFV
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_5
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2901..4055)
DNA (1155bp) protein (385aa)
UPI0003D6B8B5 related cluster n=1 Tax=unknown RepID=UPI0003D6B8B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD03278.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloh
SCNpilot_cont_300_bf_scaffold_1006_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4095..5615)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003743452 rbh
Helicase {ECO:0000313|EMBL:EZQ17732.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_7
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5612..7372)
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003716904 rbh
ATP-dependent OLD family endonuclease {ECO:0000313|EMBL:KEZ02867.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
ATP-dependent OLD family endonuclease
SCNpilot_cont_300_bf_scaffold_1006_8
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7868..8140
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4YY50_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:GAN46944.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8137..8511
DNA (375bp) protein (125aa)
Xre-family transcriptional regulator n=2 Tax=Sphingobium RepID=D4YY51_SPHJU
XRE family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EQB00473.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium b
SCNpilot_cont_300_bf_scaffold_1006_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8559..9530
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F995B
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_11
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9527..10213
DNA (687bp) protein (229aa)
peptidase C1 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037ED9D6
Putative protease {ECO:0000313|EMBL:GAN46947.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp
putative protease
SCNpilot_cont_300_bf_scaffold_1006_12
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..10955
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4YY54_SPHJU rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN46948.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_13
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10928..11629)
DNA (702bp) protein (234aa)
uracil-DNA glycosylase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000381BE46 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN46949.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_14
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11626..12810)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI0003817152 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN46950.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1006_15
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13190..13408)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU9_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54087.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
SCNpilot_cont_300_bf_scaffold_1006_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13792..15924
DNA (2133bp) protein (711aa)
ParB domain-containing protein nuclease n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9V5_9RHIZ
ParB domain-containing protein nuclease
ParB domain-containing protein nuclease {ECO:0000313|EMBL:AGK59803.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hy
SCNpilot_cont_300_bf_scaffold_1006_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16138..18717
DNA (2580bp) protein (860aa)
UPI0003CEE418 related cluster n=1 Tax=unknown RepID=UPI0003CEE418
Methylase {ECO:0000313|EMBL:ESY71796.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
methylase/helicase
Displaying 17 items

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