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SCNpilot_cont_300_bf_scaffold_1016

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1016_1
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..339
DNA (339bp) protein (113aa)
Putative hydrolase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSG4_TISMK
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AFK55702.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (str
SCNpilot_cont_300_bf_scaffold_1016_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..950)
DNA (615bp) protein (205aa)
aminoglycoside phosphotransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379FC0F
aminoglycoside phosphotransferase
Putative homoserine kinase type II (Protein kinase fold) {ECO:0000313|EMBL:EJJ28419.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
SCNpilot_cont_300_bf_scaffold_1016_3
unknown

Not on your lists

comp(1050..1355)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1016_4
unknown

Not on your lists

1450..2043
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1016_5
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2147..3199
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TQ60_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY84548.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acu
SCNpilot_cont_300_bf_scaffold_1016_6
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3192..4187)
DNA (996bp) protein (332aa)
2-nitropropane dioxygenase NPD n=1 Tax=Burkholderia sp. H160 RepID=B5WC76_9BURK rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:EEA03993.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
2-nitropropane dioxygenase
SCNpilot_cont_300_bf_scaffold_1016_7
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4201..5367)
DNA (1167bp) protein (389aa)
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:EUC16375.1}; EC=2.3.1.176 {ECO:0000313|EMBL:EUC16375.1};; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
Acetyl-CoA acetyltransferase n=1 Tax=Burkholderia sp. BT03 RepID=J2IZ95_9BURK rbh
thiolase
SCNpilot_cont_300_bf_scaffold_1016_8
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5393..6937)
DNA (1545bp) protein (515aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ESS13191.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ESS13191.1};; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobac
Long-chain-fatty-acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YIY4_9PROT
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
SCNpilot_cont_300_bf_scaffold_1016_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6954..7736)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000376FC47 rbh
short chain dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
short chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_1016_10
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7748..8728)
DNA (981bp) protein (327aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23237.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_cont_300_bf_scaffold_1016_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8771..9583)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWA2_Rokubacteria_70_23_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase id=3937166 bin=GWF2_Methylomirabilis_70_14 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SCNpilot_cont_300_bf_scaffold_1016_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9662..10435
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EFH11405.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EFH11405.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMR4_9PROT
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_1016_13
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10432..11103)
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBQ3_BORPD
TetR family transcriptional regulator
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:CAP41468.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
SCNpilot_cont_300_bf_scaffold_1016_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11218..11637
DNA (420bp) protein (140aa)
hypothetical protein, partial n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00037CC182
dfrA Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
dfrA
SCNpilot_cont_300_bf_scaffold_1016_15
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11668..12255)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003762A9E
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABF11420.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstoni
SCNpilot_cont_300_bf_scaffold_1016_16
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..12971)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003176369 rbh
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDY74263.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkh
antibiotic biosynthesis monooxygenase
SCNpilot_cont_300_bf_scaffold_1016_17
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13249..13530
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00031A2517
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerob
SCNpilot_cont_300_bf_scaffold_1016_18
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13434..13892)
DNA (459bp) protein (153aa)
DoxX family protein n=1 Tax=Pseudomonas moraviensis R28 RepID=V8R9G9_9PSED
DoxX; K15977 putative oxidoreductase Tax=CG_Rhodof_01
DoxX
SCNpilot_cont_300_bf_scaffold_1016_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13889..14662)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037A5754
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89484.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
SCNpilot_cont_300_bf_scaffold_1016_20
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14749..15684)
DNA (936bp) protein (312aa)
UPF0276 protein PMI42_07010 n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VRW5_9BRAD
uncharacterized protein conserved in bacteria, NMA0228-like
UPF0276 protein GL4_3120 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitep
SCNpilot_cont_300_bf_scaffold_1016_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15699..15989)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNV2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72139.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
signal peptide protein
SCNpilot_cont_300_bf_scaffold_1016_22
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16153..16701
DNA (549bp) protein (183aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTN9_METTR
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJN12614.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_1016_23
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16698..17333
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00031A16F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57973.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
SCNpilot_cont_300_bf_scaffold_1016_24
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17358..17684)
DNA (327bp) protein (109aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
SCNpilot_cont_300_bf_scaffold_1016_25
unknown

Not on your lists

18032..18397
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1016_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18482..19699)
DNA (1218bp) protein (406aa)
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Formyl-CoA transferase (EC:2.8.3.16)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-K22 RepID=UPI0003B78F3D
SCNpilot_cont_300_bf_scaffold_1016_27
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19937..20848
DNA (912bp) protein (304aa)
Secreted protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KU54_9BURK
Secreted protein {ECO:0000313|EMBL:EGI76604.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1016_28
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20890..21120)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J357_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KJV09682.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1016_29
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21383..23623)
DNA (2241bp) protein (747aa)
adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
UPI0003D014C4 related cluster n=1 Tax=unknown RepID=UPI0003D014C4
adenylate cyclase
SCNpilot_cont_300_bf_scaffold_1016_30
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23680..24366)
DNA (687bp) protein (229aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJR2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJB93389.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
Crp/FNR family transcriptional regulator
Displaying items 1-30 of 53 in total

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