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SCNpilot_cont_300_bf_scaffold_1122

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1122_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566..907)
DNA (342bp) protein (114aa)
Membrane metal-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JY86_9PROT
Conserved menbrane protein of unknown function. Containing competence protein domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1122_2
unknown

Not on your lists

1150..2604
DNA (1455bp) protein (485aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1122_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2754..3977
DNA (1224bp) protein (408aa)
Glutamate--tRNA ligase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKZ8_AZOBR
gltX2; glutamyl-tRNA synthetase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glutamyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_1122_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3968..4108
DNA (141bp) protein (47aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y452_9PROT
gltX2; glutamyl-tRNA synthetase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1122_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..5040
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HB84_PSEAC
ABC transporter membrane spanning protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter, membrane spanning protein
SCNpilot_cont_300_bf_scaffold_1122_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5161..6459
DNA (1299bp) protein (433aa)
gltA; citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
gltA; citrate synthase I (EC:2.3.3.1)
Citrate synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GXS4_9PROT rbh
SCNpilot_cont_300_bf_scaffold_1122_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6497..6700
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1122_8
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..7275)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=552518 species="Bacteria; Proteobacteria; Alp
gloA; lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV21_AZOS1
SCNpilot_cont_300_bf_scaffold_1122_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7285..7761)
DNA (477bp) protein (159aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GXS9_9PROT
fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1122_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..8204)
DNA (426bp) protein (142aa)
Outer membrane protein assembly factor BamA n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KSQ3_MICAA
outer membrane protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Outer membrane protein assembly factor YaeT precursor
SCNpilot_cont_300_bf_scaffold_1122_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8168..10102)
DNA (1935bp) protein (645aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR
outer membrane protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
outer membrane protein
SCNpilot_cont_300_bf_scaffold_1122_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10144..11523)
DNA (1380bp) protein (460aa)
regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Regulator of sigma E protease n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILL4_9SPHN rbh
regulator
SCNpilot_cont_300_bf_scaffold_1122_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11554..12756)
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YCU0_9PROT rbh
SCNpilot_cont_300_bf_scaffold_1122_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12753..13448)
DNA (696bp) protein (232aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY14_PARL1
SCNpilot_cont_300_bf_scaffold_1122_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13429..14169)
DNA (741bp) protein (247aa)
undecaprenyl pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035F4DE4
SCNpilot_cont_300_bf_scaffold_1122_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..14723)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9E2W5_9PROT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
frr; ribosome recycling factor
SCNpilot_cont_300_bf_scaffold_1122_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14726..15451)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV33_AZOS1 rbh
SCNpilot_cont_300_bf_scaffold_1122_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15521..16447)
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLK0_9PROT rbh
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
tsf; Elongation factor Ts (EF-Ts)
SCNpilot_cont_300_bf_scaffold_1122_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16530..17321)
DNA (792bp) protein (264aa)
30S ribosomal protein S2 n=1 Tax=Elioraea tepidiphila RepID=UPI0003799434 rbh
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpsB; 30S ribosomal protein S2
SCNpilot_cont_300_bf_scaffold_1122_20
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17500..18513)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=4 Tax=Burkholderia multivorans RepID=B9BTD3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO33642.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
SCNpilot_cont_300_bf_scaffold_1122_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18510..21956)
DNA (3447bp) protein (1149aa)
dnaE1; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
DNA polymerase III, alpha subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG81_AZOL4 rbh
dnaE1; DNA polymerase III subunit alpha
SCNpilot_cont_300_bf_scaffold_1122_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21988..22671)
DNA (684bp) protein (228aa)
peptide ABC transporter ATPase; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lolD; Lipoprotein-releasing system ATP-binding protein lolD (EC:3.6.3.-)
Peptide ABC transporter ATPase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TWD9_PHAFV
SCNpilot_cont_300_bf_scaffold_1122_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22664..23941)
DNA (1278bp) protein (426aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUL9_9PROT
lolE; lipoprotein-releasing system permease; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lolC; Lipoprotein ABC transporter; permease component LolC
SCNpilot_cont_300_bf_scaffold_1122_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23934..24941)
DNA (1008bp) protein (336aa)
Lipoprotein-releasing system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWI1_AZOS1
lolC; lipoprotein ABC transporter; permease component LolC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lolE; lipoprotein-releasing system permease
SCNpilot_cont_300_bf_scaffold_1122_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24952..26535)
DNA (1584bp) protein (528aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D18B5 rbh
proS; prolyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_1122_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26702..27436
DNA (735bp) protein (245aa)
Xanthine dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRP2_9PROT
xanthine dehydrogenase; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1122_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27376..27951
DNA (576bp) protein (192aa)
Putative xanthine/uracil permease n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6P3_9PROT
xanthine dehydrogenase; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative xanthine/uracil permease
SCNpilot_cont_300_bf_scaffold_1122_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28222..28467)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B698AB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1122_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28480..28884)
DNA (405bp) protein (135aa)
lactoylglutathione lyase and related lyase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Lactoylglutathione lyase and related lyase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W446_MAGSA
lactoylglutathione lyase and related lyase
SCNpilot_cont_300_bf_scaffold_1122_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28907..29704)
DNA (798bp) protein (266aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL17_9PROT
beta-lactamase domain-containing protein; K07021 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative hydrolase of the metallo-beta-lactamase superfamily
Displaying 30 items

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