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SCNpilot_cont_300_bf_scaffold_1212

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1212_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..873)
DNA (873bp) protein (291aa)
nrtC; ABC transporter ATP-binding protein; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Nitrate transport system ATP-binding protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J6G3_HYPSM rbh
nrtC; nitrate transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1212_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(879..1400)
DNA (522bp) protein (174aa)
Nitrate ABC transporter permease n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBI4_9BRAD
nitrate ABC transporter inner membrane protein; K15577 nitrate/nitrite transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
nitrate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1212_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1643..3022)
DNA (1380bp) protein (460aa)
ABC transporter nitrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QEK1_RHOPT rbh
nrtA; nitrate transporter component nrtA; K15576 nitrate/nitrite transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
nitrate ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1212_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..3927
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036757B0
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
conserved hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4069..4875
DNA (807bp) protein (269aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Prolipoprotein diacylglyceryl transferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTN8_PHAMO
prolipoprotein diacylglyceryl transferase
SCNpilot_cont_300_bf_scaffold_1212_6
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(4995..5216)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:JAE50167.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae
SCNpilot_cont_300_bf_scaffold_1212_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5679..5933
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZS6_AZOBR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..6697
DNA (768bp) protein (256aa)
Uncharacterized conserved protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9S8_MAGSA
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6752..7750
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGR4_9RHIZ
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7903..9489
DNA (1587bp) protein (529aa)
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
SCNpilot_cont_300_bf_scaffold_1212_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9923..11137
DNA (1215bp) protein (405aa)
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_1212_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11247..12188
DNA (942bp) protein (314aa)
oligopeptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Oligopeptide ABC transporter, permease protein id=4153831 bin=GWC2_Methylomirabilis_70_16 species=Ruegeria pomeroyi genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_1212_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12185..13120
DNA (936bp) protein (312aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQG7_9PROT rbh
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oligopeptide ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_1212_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13120..14754
DNA (1635bp) protein (545aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTA7_9PROT rbh
ABC transporter family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter family protein rbh
SCNpilot_cont_300_bf_scaffold_1212_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14838..16427)
DNA (1590bp) protein (530aa)
monooxygenase (EC:1.14.13.22)
FAD dependent oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIS7_9PROT rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDP66560.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_cont_300_bf_scaffold_1212_16
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16543..17856
DNA (1314bp) protein (438aa)
FAD dependent oxidoreductase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G987_RHIML
Oxidoreductase {ECO:0000313|EMBL:CDX40689.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_1212_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18095..20437
DNA (2343bp) protein (781aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Carbon-monoxide dehydrogenase large subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALR4_AZOBR
coxL2; carbon-monoxide dehydrogenase large subunit
SCNpilot_cont_300_bf_scaffold_1212_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20434..21027
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3B140_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21053..22357
DNA (1305bp) protein (435aa)
hemolysin secretion protein D n=1 Tax=Xanthobacteraceae RepID=UPI00035D6818
RND family efflux transporter MFP subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
RND family efflux transporter MFP subunit
SCNpilot_cont_300_bf_scaffold_1212_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22376..25672
DNA (3297bp) protein (1099aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EN87_METSB rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_cont_300_bf_scaffold_1212_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..26702
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DA40C
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1212_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26741..28270
DNA (1530bp) protein (510aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1212_23
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28332..29162)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Amycolatopsis mediterranei RepID=D8I8Z8_AMYMU rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEK44367.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis med
SCNpilot_cont_300_bf_scaffold_1212_24
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29179..29562)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTD1_GRABC
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJC52673.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_1212_25
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29649..31169)
DNA (1521bp) protein (507aa)
aldA; chloroacetaldehyde dehydrogenase (EC:1.2.1.22)
Aldehyde dehydrogenase, chloroacetaldehyde dehydrogenase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIP0_HYPSM
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJC52672.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_1212_26
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31259..32662)
DNA (1404bp) protein (468aa)
aldehyde dehydrogenase family protein (EC:1.2.1.-)
Putative aldehyde dehydrogenase family protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EIC7_BRASB rbh
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49293.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
SCNpilot_cont_300_bf_scaffold_1212_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32793..33170)
DNA (378bp) protein (126aa)
Molybdate transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6H7_AZOS1
modA; molybdate transport system substrate-binding protein
Molybdate transport system substrate-binding protein {ECO:0000313|EMBL:BAI76256.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirill
SCNpilot_cont_300_bf_scaffold_1212_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33217..33519)
DNA (303bp) protein (101aa)
Molybdate transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6H7_AZOS1
modA; molybdate transport system substrate-binding protein
Molybdate transport system substrate-binding protein {ECO:0000313|EMBL:BAI76256.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirill
SCNpilot_cont_300_bf_scaffold_1212_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33519..33986)
DNA (468bp) protein (156aa)
Aldo/keto reductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAY9_ANADF
Putative aldo/keto reductase {ECO:0000313|EMBL:GAO38661.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_1212_30
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34573..35301
DNA (729bp) protein (243aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A (EC:1.8.4.11)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037AE4CE
Displaying items 1-30 of 31 in total

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