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SCNpilot_cont_300_bf_scaffold_1220

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1220_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..231
DNA (231bp) protein (77aa)
ABC transporter permease n=1 Tax=Xanthobacteraceae RepID=UPI000361D663
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADH89048.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;"
SCNpilot_cont_300_bf_scaffold_1220_2
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228..875
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B6A8A rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EOA05959.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb
hisM; amino acid ABC transporter permease rbh
SCNpilot_cont_300_bf_scaffold_1220_3
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

862..1377
DNA (516bp) protein (172aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002E4AA2E
amino acid ABC transporter ATPase
ABC-type amino acid transport system, ATPase component protein {ECO:0000313|EMBL:ADJ65352.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Her
SCNpilot_cont_300_bf_scaffold_1220_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1350..1538
DNA (189bp) protein (63aa)
ABC transporter nucleotide binding ATPase protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IB69_AZOC5
ABC transporter permease
ABC transporter nucleotide binding ATPase protein {ECO:0000313|EMBL:BAF88616.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" so
SCNpilot_cont_300_bf_scaffold_1220_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1514..2236)
DNA (723bp) protein (241aa)
diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1220_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2262..2987)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036371C7 rbh
putative extracellular solute-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_1220_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3034..3396
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWM3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63124.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3682..5220
DNA (1539bp) protein (513aa)
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Carboxylesterase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTG9_9CHLR rbh
carboxylesterase type B
SCNpilot_cont_300_bf_scaffold_1220_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..6323
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003743106 rbh
mandelate racemase/muconate lactonizing enzyme Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
mandelate racemase/muconate lactonizing enzyme
SCNpilot_cont_300_bf_scaffold_1220_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6399..6824
DNA (426bp) protein (142aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1220_11
bacterium YEK0313, Bacteria

Not on your lists

comp(6830..7696)
DNA (867bp) protein (289aa)
endonuclease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D31338 rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:CEJ15037.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
conserved protein of unknown function [Xylose isomerase-type TIM barrel domain]
SCNpilot_cont_300_bf_scaffold_1220_12
bacterium YEK0313, Bacteria

Not on your lists

comp(7705..8874)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYI8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ15038.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_13
bacterium YEK0313, Bacteria

Not on your lists

comp(8900..10051)
DNA (1152bp) protein (384aa)
Putative dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYI9_9RHIZ rbh
1,5-anhydro-D-fructose reductase {ECO:0000313|EMBL:CEJ15039.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oxidoreductase rbh
SCNpilot_cont_300_bf_scaffold_1220_14
bacterium YEK0313, Bacteria

Not on your lists

comp(10183..11016)
DNA (834bp) protein (278aa)
ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I616_AZOC5 rbh
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:CEJ15041.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1220_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11024..12022)
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYJ2_9RHIZ rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EIM29034.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
putative ABC transporter, periplasmic component
SCNpilot_cont_300_bf_scaffold_1220_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12063..12878)
DNA (816bp) protein (272aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYJ3_9RHIZ rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EIM29035.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobact
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1220_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12966..13625)
DNA (660bp) protein (220aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYJ4_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM29036.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotonon
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1220_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13716..14189
DNA (474bp) protein (158aa)
UPF0178 protein MicloDRAFT_00016220 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYV8_9RHIZ
hypothetical protein; K09768 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_19
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..14698)
DNA (513bp) protein (171aa)
GntR family transcriptional regulator n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UAA3_ADVKW
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1220_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14898..15956
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMB9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX57648.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
taurine catabolism dioxygenase TauD/TfdA
SCNpilot_cont_300_bf_scaffold_1220_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16006..16986
DNA (981bp) protein (327aa)
Bordetella uptake domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SMM6_RHIET
bordetella uptake domain-containing protein
Bordetella uptake domain-containing protein {ECO:0000313|EMBL:AGS23307.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
SCNpilot_cont_300_bf_scaffold_1220_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16997..17968
DNA (972bp) protein (324aa)
Bordetella uptake domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SMM6_RHIET
bordetella uptake domain-containing protein
Bordetella uptake domain-containing protein {ECO:0000313|EMBL:AGS23307.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
SCNpilot_cont_300_bf_scaffold_1220_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

18073..19086
DNA (1014bp) protein (338aa)
Extracellular solute-binding protein family 1 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEQ8_AMICL rbh
family 1 extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
family 1 extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_1220_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

19090..20790
DNA (1701bp) protein (567aa)
ABC transporter, permease protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QGG7_9BURK rbh
binding-protein-dependent transport system inner membrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_1220_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

20795..21856
DNA (1062bp) protein (354aa)
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JF1_SYMTH rbh
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1220_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21860..23455)
DNA (1596bp) protein (532aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJH1_9BRAD
peptide ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter peptide-binding protein
SCNpilot_cont_300_bf_scaffold_1220_27
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23730..24734
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DR57_BRAJP rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY52832.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_28
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24737..25729
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DR56_BRAJP rbh
ABC transporter {ECO:0000313|EMBL:KJC61722.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM2
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25768..27423
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DR55_BRAJP rbh
ABC transporter permease protein {ECO:0000313|EMBL:AHY52834.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1220_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27504..29897
DNA (2394bp) protein (798aa)
AsmA n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZU8_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AsmA protein
Displaying 30 items

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