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SCNpilot_cont_300_bf_scaffold_1276

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1276_1
unknown

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1..93
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1276_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77..1462
DNA (1386bp) protein (462aa)
amidase (EC:3.5.1.4)
amidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003717817 rbh
putative amidase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1553..2101
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRQ6_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1276_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2159..3466)
DNA (1308bp) protein (436aa)
TRAP transporter, DctM subunit n=1 Tax=Rhizobium sp. CF080 RepID=J3CA07_9RHIZ rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EUC00811.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
TRAP dicarboxylate transporter, DctM subunit
SCNpilot_cont_300_bf_scaffold_1276_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3470..4012)
DNA (543bp) protein (181aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZC5_9RHIZ
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EIM29317.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1276_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4016..4984)
DNA (969bp) protein (323aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZC7_9RHIZ
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EIM29319.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; M
TRAP dicarboxylate transporter
SCNpilot_cont_300_bf_scaffold_1276_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5032..5967)
DNA (936bp) protein (312aa)
Sodium bile acid symporter family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIQ1_9PROT
hypothetical protein; K03453 bile acid:Na+ symporter, BASS family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1276_8
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6087..6677
DNA (591bp) protein (197aa)
Creatinine amidohydrolase superfamily protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A422_PELCD
Creatinine amidohydrolase superfamily protein {ECO:0000313|EMBL:ABA88885.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" sou
creatinine amidohydrolase superfamily protein
SCNpilot_cont_300_bf_scaffold_1276_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6735..7109
DNA (375bp) protein (125aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7159..7530
DNA (372bp) protein (124aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..8031
DNA (462bp) protein (154aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..8521
DNA (444bp) protein (148aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_13
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8845..10434
DNA (1590bp) protein (530aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000308F0E8
peptide ABC transporter substrate-binding protein
ABC transporter peptide-binding protein {ECO:0000313|EMBL:BAL79990.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br
SCNpilot_cont_300_bf_scaffold_1276_14
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10486..11811
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FUA2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP88478.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10
SCNpilot_cont_300_bf_scaffold_1276_15
uncultured proteobacterium, Proteobacteria, Bacteria

Not on your lists

11927..13123
DNA (1197bp) protein (399aa)
ABC-type branched-chain amino acid transport system n=1 Tax=uncultured proteobacterium RepID=R4MXL2_9PROT rbh
ABC-type branched-chain amino acid transport system {ECO:0000313|EMBL:AGL33523.1}; TaxID=153809 species="Bacteria; Proteobacteria; environmental samples.;" source="uncultured proteobacterium.;"
extracellular ligand-binding receptor
SCNpilot_cont_300_bf_scaffold_1276_16
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13136..14311
DNA (1176bp) protein (392aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15UJ8_PSEA6 rbh
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ABG40440.1}; TaxID=342610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseu
SCNpilot_cont_300_bf_scaffold_1276_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14403..15374)
DNA (972bp) protein (324aa)
hypothetical protein, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B36F92 rbh
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
polysaccharide deacetylase
SCNpilot_cont_300_bf_scaffold_1276_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15375..15950)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5I4_9PROT
Phage capsid protein {ECO:0000313|EMBL:KHL25965.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercu
HIT family protein
SCNpilot_cont_300_bf_scaffold_1276_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15955..16971)
DNA (1017bp) protein (339aa)
luciferase-like monooxygenase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288D90A
luciferase-like monooxygenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
luciferase family protein
SCNpilot_cont_300_bf_scaffold_1276_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17037..18536
DNA (1500bp) protein (500aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1276_21
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19083..19307)
DNA (225bp) protein (75aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE25560.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_300_bf_scaffold_1276_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21097..21537)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEU0_AZOBR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cupin
SCNpilot_cont_300_bf_scaffold_1276_23
unknown

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comp(21605..21913)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1276_24
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22503..23408
DNA (906bp) protein (302aa)
Molybdopterin binding oxidoreductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X2Y1_9RHIZ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46728.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
molybdopterin binding oxidoreductase
SCNpilot_cont_300_bf_scaffold_1276_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23490..23741
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGF7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05545.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
sulfite:cytochrome c oxidoreductase subunit B
SCNpilot_cont_300_bf_scaffold_1276_26

Not on your lists

23845..25080
DNA (1236bp) protein (412aa)
GTP cyclohydrolase n=1 Tax=mine drainage metagenome RepID=E6PU71_9ZZZZ rbh
GTP cyclohydrolase {ECO:0000313|EMBL:CBH98478.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1276_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25743..26249
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DG17_MYXXD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
uracil phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_1276_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26388..26618
DNA (231bp) protein (77aa)
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
uracil phosphoribosyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CEA09
uracil phosphoribosyltransferase
Displaying 28 items

View Taxonomy