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SCNpilot_cont_300_bf_scaffold_1286

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1286_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..618
DNA (618bp) protein (206aa)
UPI0003CEE5DE related cluster n=1 Tax=unknown RepID=UPI0003CEE5DE
Transposase {ECO:0000313|EMBL:ESY70601.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.
SCNpilot_cont_300_bf_scaffold_1286_2
unknown

Not on your lists

906..1169
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1286_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2935)
DNA (1290bp) protein (430aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD67_9SPHN
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1286_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3338..4297)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKE4_9BRAD
zinc-binding alcohol dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
zinc-binding alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_1286_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4322..5863)
DNA (1542bp) protein (514aa)
acyl-CoA synthetase (EC:6.2.1.-) Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
acyl-CoA synthetase (EC:6.2.1.-)
Acetyl-CoA synthetase ATP-DEPENDENT AMP-BINDING ENZYME FAMILY-RELATED n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R8U4_CUPTR
SCNpilot_cont_300_bf_scaffold_1286_6
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5970..6971)
DNA (1002bp) protein (334aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJF24277.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJF24277.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; R
ABC transporter, ATP-binding protein n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9T2E0_COREQ rbh
putative peptide ABC transport protein
SCNpilot_cont_300_bf_scaffold_1286_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6968..7954)
DNA (987bp) protein (329aa)
oppD2; Oligopeptide transport protein (ABC superfamily, ATP-binding protein) (EC:3.6.3.-)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:CCG03705.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCG03705.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geoderm
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00036078AA rbh
SCNpilot_cont_300_bf_scaffold_1286_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7963..8844)
DNA (882bp) protein (294aa)
Glutathione transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE34_9BRAD
Glutathione transport system permease {ECO:0000313|EMBL:ERF80649.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1286_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9779)
DNA (939bp) protein (313aa)
peptide ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369C314
Putative didpeptide ABC transporter permease protein {ECO:0000313|EMBL:EJZ32644.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1286_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..11357)
DNA (1539bp) protein (513aa)
4-phytase (EC:3.1.3.26)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036739F1
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC60877.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
SCNpilot_cont_300_bf_scaffold_1286_11
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..12229
DNA (663bp) protein (221aa)
Regulatory protein, TetR n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UD0_CUPPJ
regulatory protein TetR
Regulatory protein, TetR {ECO:0000313|EMBL:AAZ63254.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatu
SCNpilot_cont_300_bf_scaffold_1286_12
unknown

Not on your lists

12226..12354
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1286_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12472..13284
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F201_SPHCR rbh
enoyl-CoA hydratase/isomerase family protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_1286_14

Not on your lists

13454..14341
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRG3_9ZZZZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEM45146.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
alpha/beta hydrolase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1286_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14436..14999
DNA (564bp) protein (188aa)
Carboxymuconolactone decarboxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8D4_PHEZH
carboxymuconolactone decarboxylase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
carboxymuconolactone decarboxylase
SCNpilot_cont_300_bf_scaffold_1286_16
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15001..15819
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HLY1_9CAUL
putative short-chain dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
3-oxoacyl-ACP reductase
SCNpilot_cont_300_bf_scaffold_1286_17
unknown

Not on your lists

16419..16613
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1286_18
unknown

Not on your lists

16987..17232
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1286_19
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17282..17488
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2J5_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09450.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
SCNpilot_cont_300_bf_scaffold_1286_20
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18141..18479
DNA (339bp) protein (113aa)
alpha/beta hydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034688BF
alpha/beta hydrolase
Hydrolase-like protein protein of the alpha/beta-hydrolase fold family {ECO:0000313|EMBL:ADE53145.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Cora
SCNpilot_cont_300_bf_scaffold_1286_21
unknown

Not on your lists

18524..18949
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1286_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18968..19747)
DNA (780bp) protein (260aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative two-component response regulator
Displaying 22 items

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