ggKbase home page

SCNpilot_cont_300_bf_scaffold_1366

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1366_1
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDV1_METPB
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:BAQ16724.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenite
SCNpilot_cont_300_bf_scaffold_1366_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(494..2314)
DNA (1821bp) protein (607aa)
Type I secretion system ATPase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PK54_9BRAD
Type I secretion system ATPase {ECO:0000313|EMBL:EKS39905.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandens
type I secretion system ATPase
SCNpilot_cont_300_bf_scaffold_1366_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2481..3284)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YE06_THIV6
lipoprotein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1366_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3354..4100
DNA (747bp) protein (249aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW41_9BURK
GCN5-like N-acetyltransferase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_1366_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4163..5887
DNA (1725bp) protein (575aa)
lcfA; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lcfA; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK95_9BRAD
SCNpilot_cont_300_bf_scaffold_1366_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6118..6708
DNA (591bp) protein (197aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1366_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6722..8320
DNA (1599bp) protein (533aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Gamma-glutamyltransferase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IQD3_MYCSM
acylase
SCNpilot_cont_300_bf_scaffold_1366_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8317..8709)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003718B83
glutathione-dependent formaldehyde-activating protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_300_bf_scaffold_1366_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8709..9374)
DNA (666bp) protein (222aa)
Acetyltransferase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6I2_RAMTT
acetyltransferase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
acetyltransferase-like protein
SCNpilot_cont_300_bf_scaffold_1366_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9371..9742)
DNA (372bp) protein (124aa)
Probable lactoylglutathione lyase protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TT60_9PROT
lactoylglutathione lyase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lactoylglutathione lyase
SCNpilot_cont_300_bf_scaffold_1366_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9836..10387
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TT61_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1366_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10449..10745)
DNA (297bp) protein (99aa)
sterol-binding protein n=1 Tax=Spirosoma luteum RepID=UPI0003826FBE
Sterol-binding domain protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Sterol-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_1366_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10908..11771
DNA (864bp) protein (288aa)
Short-chain dehydrogenase/reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1S3_CORCM rbh
short-chain dehydrogenase/reductase SDR; K13774 citronellol/citronellal dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fadH; short-chain dehydrogenase/reductase
SCNpilot_cont_300_bf_scaffold_1366_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11776..13392
DNA (1617bp) protein (539aa)
propionyl-CoA carboxylase; K13778 geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
methylcrotonoyl-CoA carboxylase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036BEB49 rbh
acetyl-CoA carboxylase carboxyltransferase
SCNpilot_cont_300_bf_scaffold_1366_15
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13397..13669
DNA (273bp) protein (91aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C973_ALCDB
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFT70074.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax diese
Displaying 15 items

View Taxonomy