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SCNpilot_cont_300_bf_scaffold_1692

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1692_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..126
DNA (126bp) protein (42aa)
nrtC; ABC transporter ATP-binding protein; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1692_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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179..625
DNA (447bp) protein (149aa)
cynS; Cyanate lyase; K01725 cyanate lyase [EC:4.2.1.104] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Cyanate hydratase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J6G4_HYPSM
cynS; Cyanate lyase
SCNpilot_cont_300_bf_scaffold_1692_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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732..1511
DNA (780bp) protein (260aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J1T637_9RHIZ
putative GntR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1692_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1508..2341
DNA (834bp) protein (278aa)
extracellular solute-binding protein (EC:4.2.1.51) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
extracellular solute-binding protein (EC:4.2.1.51) rbh
Putative extracellular solute-binding protein n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BSF8_PUNMI rbh
SCNpilot_cont_300_bf_scaffold_1692_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2357..3034
DNA (678bp) protein (226aa)
Putative inner membrane amino-acid ABC transporter permease protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RGS0_9RHOB rbh
putative inner membrane amino-acid ABC transporter permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative inner membrane amino-acid ABC transporter permease protein rbh
SCNpilot_cont_300_bf_scaffold_1692_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3034..3699
DNA (666bp) protein (222aa)
Putative inner membrane amino-acid ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZAS4_ROSLO rbh
inner membrane amino-acid ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
inner membrane amino-acid ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1692_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3704..4480
DNA (777bp) protein (259aa)
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZAS3_ROSLO rbh
ABC transporter, ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
amino acid ABC transporter ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_1692_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4492..5409
DNA (918bp) protein (306aa)
branched-chain amino acid aminotransferase (EC:2.6.1.21); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
branched-chain amino acid aminotransferase (EC:2.6.1.21)
Putative branched-chain amino acid aminotransferase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BSF4_PUNMI rbh
SCNpilot_cont_300_bf_scaffold_1692_9
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5410..7077)
DNA (1668bp) protein (556aa)
methylhydantoinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B41173 rbh
methylhydantoinase
Methylhydantoinase {ECO:0000313|EMBL:AJE98296.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_300_bf_scaffold_1692_10
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7092..9104)
DNA (2013bp) protein (671aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9) rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AAZ65568.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AAZ65568.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhold
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46MQ7_CUPPJ rbh
SCNpilot_cont_300_bf_scaffold_1692_11
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9129..9893)
DNA (765bp) protein (255aa)
Kasugamycin 2'-N acetyltransferase n=1 Tax=Burkholderia glumae RepID=I4DEC2_BURGL
Kasugamycin 2'-N acetyltransferase {ECO:0000313|EMBL:BAM16262.1}; TaxID=337 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
acetyltransferase domain protein
SCNpilot_cont_300_bf_scaffold_1692_12
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9890..10141)
DNA (252bp) protein (84aa)
Protein containing DUF526 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U118_9PROT
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ72282.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira s
SCNpilot_cont_300_bf_scaffold_1692_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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10211..10945
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8W8_9BRAD
enoyl-CoA hydratase/isomerase family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_1692_14
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10985..11200
DNA (216bp) protein (72aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZT90_9PROT
pyrroline-5-carboxylate reductase
Displaying 14 items

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