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SCNpilot_cont_300_bf_scaffold_1726

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1726_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1283)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366C6F9
aldehyde oxidase/xanthine dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
aldehyde oxidase/xanthine dehydrogenase
SCNpilot_cont_300_bf_scaffold_1726_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1280..2110)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000370F346 rbh
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
molybdopterin dehydrogenase FAD-binding protein
SCNpilot_cont_300_bf_scaffold_1726_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2196..2669)
DNA (474bp) protein (158aa)
Co-chaperonin GroES n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNL2_9PROT
MarR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1726_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2801..4342)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GM05_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB01058.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
AMP-dependent synthetase/ligase
SCNpilot_cont_300_bf_scaffold_1726_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4453..5655
DNA (1203bp) protein (401aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WEH1_VEREI rbh
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_300_bf_scaffold_1726_6
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5674..5898)
DNA (225bp) protein (75aa)
Biotin/lipoate binding domain protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQE8_RUEPO
biotin/lipoate binding domain protein
Biotin/lipoate binding domain protein {ECO:0000313|EMBL:AAV95792.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeri
SCNpilot_cont_300_bf_scaffold_1726_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5979..6596
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WPL2_VEREI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABM59569.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="
SCNpilot_cont_300_bf_scaffold_1726_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6614..7597
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW38_VARPS
extra-cytoplasmic solute receptor Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1726_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7623..9155
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QG41_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW89033.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
SCNpilot_cont_300_bf_scaffold_1726_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9186..9737)
DNA (552bp) protein (184aa)
Acetyltransferase n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YHQ0_9PSED
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AFM32034.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri CC
SCNpilot_cont_300_bf_scaffold_1726_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9737..10711)
DNA (975bp) protein (325aa)
Ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Ornithine cyclodeaminase/mu-crystallin family protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4C5_RHIFH rbh
Ornithine cyclodeaminase/mu-crystallin family protein
SCNpilot_cont_300_bf_scaffold_1726_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11141..11488)
DNA (348bp) protein (116aa)
Integration host factor subunit beta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZUX1_9PROT
nucleoid DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
integration host factor beta-subunit (IHF-beta)
SCNpilot_cont_300_bf_scaffold_1726_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11647..13371)
DNA (1725bp) protein (575aa)
30S ribosomal protein S1 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRA2_AZOS1 rbh
rpsA; 30S ribosomal subunit protein S1 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpsA; 30S ribosomal protein S1
SCNpilot_cont_300_bf_scaffold_1726_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13522..13989)
DNA (468bp) protein (156aa)
cmk; cytidine monophosphate (CMP) kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cmk; Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6P6_9PROT
SCNpilot_cont_300_bf_scaffold_1726_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14096..14467)
DNA (372bp) protein (124aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003775082
3-phosphoshikimate 1-carboxyvinyltransferase
SCNpilot_cont_300_bf_scaffold_1726_16
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15079..15450
DNA (372bp) protein (124aa)
Tax=RBG_16_Gamma2_64_11_curated
SCNpilot_cont_300_bf_scaffold_1726_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15522..15884
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037E7468
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1726_18
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16132..16833)
DNA (702bp) protein (234aa)
Peptidase family M48 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZB7_9GAMM
Peptidase family M48 {ECO:0000313|EMBL:EIC22044.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thio
peptidase M48
Displaying 18 items

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