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SCNpilot_cont_300_bf_scaffold_1837

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1837_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..941)
DNA (939bp) protein (313aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; Ta
Sulfate and thiosulfate import ATP-binding protein CysA n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUC0_9RHOB rbh
sulfate ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_1837_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(961..1803)
DNA (843bp) protein (281aa)
Sulfate transport system permease protein CysW n=1 Tax=Rhodovulum sp. PH10 RepID=J6UH77_9RHOB rbh
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:EJW13306.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sou
sulfate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1837_3
bacterium YEK0313, Bacteria

Not on your lists

comp(1796..2692)
DNA (897bp) protein (299aa)
Sulfate transport system permease protein CysT n=1 Tax=Rhodovulum sp. PH10 RepID=J6JEI0_9RHOB rbh
Sulfate transport system permease protein CysT {ECO:0000313|EMBL:CEJ16099.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
sulfate ABC transporter, inner membrane subunit CysT
SCNpilot_cont_300_bf_scaffold_1837_4
bacterium YEK0313, Bacteria

Not on your lists

comp(2689..3171)
DNA (483bp) protein (161aa)
Thiosulfate-binding protein n=1 Tax=Rhodospirillum rubrum F11 RepID=G2TDC9_RHORU
Sulfate-binding protein {ECO:0000313|EMBL:CEJ16100.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
thiosulfate-binding protein
SCNpilot_cont_300_bf_scaffold_1837_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..5264)
DNA (1221bp) protein (407aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Osmosensitive K+ channel histidine kinase KdpD n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUY1_9RHOB rbh
two component sensor histidine kinase
SCNpilot_cont_300_bf_scaffold_1837_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5261..6169)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC41D
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1837_7
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6176..6655)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G9A3_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL63090.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas ars
SCNpilot_cont_300_bf_scaffold_1837_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6784..7332
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PRE0_KRIFD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB34858.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM
SCNpilot_cont_300_bf_scaffold_1837_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7299..8078)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000372C796 rbh
Inositol monophosphatase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fructose-1 6-bisphosphatase
SCNpilot_cont_300_bf_scaffold_1837_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8092..8622)
DNA (531bp) protein (177aa)
Cytochrome c class I n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJ24_METPB
cytochrome c class I; K08738 cytochrome c Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cytochrome c class I
SCNpilot_cont_300_bf_scaffold_1837_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8795..9727
DNA (933bp) protein (311aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYC9_9PROT
pheA; prephenate dehydratase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1837_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9766..10428
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodosp
Ribulose-phosphate 3-epimerase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUT6_AZOS1
ribulose-phosphate 3-epimerase
SCNpilot_cont_300_bf_scaffold_1837_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10440..11363
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HE69_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1837_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11371..12261)
DNA (891bp) protein (297aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=alpha proteobacterium BAL199 RepID=A8U173_9PROT
Xylose isomerase domain protein TIM barrel Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1837_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12349..14082
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5G2_9PROT
hypothetical protein; K06915 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ATPase rbh
SCNpilot_cont_300_bf_scaffold_1837_16
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14142..14498)
DNA (357bp) protein (119aa)
soxH; putative cytochrome C oxidase polypeptide II oxidoreductase protein (EC:1.7.2.4)
Putative cytochrome C oxidase polypeptide II oxidoreductase protein {ECO:0000313|EMBL:AEK61671.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AEK61671.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaprote
Putative cytochrome C oxidase polypeptide II oxidoreductase protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGQ8_COLFT
SCNpilot_cont_300_bf_scaffold_1837_17
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14503..14835)
DNA (333bp) protein (111aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EKH0_9BURK
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ELA00028.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
Ser/Thr protein phosphatase family protein
SCNpilot_cont_300_bf_scaffold_1837_18
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14829..15308)
DNA (480bp) protein (160aa)
Putative phosphohydrolase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LKC3_9BURK
Putative phosphohydrolase {ECO:0000313|EMBL:EJL92655.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1837_19
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15432..15962
DNA (531bp) protein (177aa)
RNA polymerase sigma factor n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FPE5_9BURK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia c
RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_1837_20
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15965..16774
DNA (810bp) protein (270aa)
Putative transmembrane anti-sigma factor n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BEQ5_BURCM
zinc-finger family protein
Zinc-finger family protein {ECO:0000313|EMBL:AJX15298.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia u
SCNpilot_cont_300_bf_scaffold_1837_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16776..17894)
DNA (1119bp) protein (373aa)
leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036D67C5 rbh
leuB; 3-isopropylmalate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1837_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17950..18564)
DNA (615bp) protein (205aa)
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
isopropylmalate isomerase n=1 Tax=Kiloniella laminariae RepID=UPI000368468B rbh
leuD; 3-isopropylmalate dehydratase, small subunit
SCNpilot_cont_300_bf_scaffold_1837_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18719..19387
DNA (669bp) protein (223aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT28_9RHIZ
nitroreductase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
nitroreductase
SCNpilot_cont_300_bf_scaffold_1837_24
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19388..19969)
DNA (582bp) protein (194aa)
RDD domain containing protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PPJ1_9CYAN
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:AFY35043.1}; Flags: Precursor;; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_cont_300_bf_scaffold_1837_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19997..20494)
DNA (498bp) protein (166aa)
RDD domain containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VIM3_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1837_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20640..22085)
DNA (1446bp) protein (482aa)
leuC; 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIC2_AZOBR rbh
leuC; 3-isopropylmalate dehydratase, large subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1837_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22093..22578)
DNA (486bp) protein (162aa)
50S ribosomal protein L19 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL73_RHOPH
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rplS; 50S ribosomal protein L19
SCNpilot_cont_300_bf_scaffold_1837_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22595..23350)
DNA (756bp) protein (252aa)
trmD; tRNA (guanine-N1-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
trmD; tRNA (guanine-N1-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRX7_AZOS1 rbh
SCNpilot_cont_300_bf_scaffold_1837_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..23880)
DNA (534bp) protein (178aa)
Ribosome maturation factor RimM n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RIMM_PARL1
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rimM; 16S rRNA-processing protein RimM
SCNpilot_cont_300_bf_scaffold_1837_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23880..24254)
DNA (375bp) protein (125aa)
30S ribosomal protein S16 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIB6_AZOBR
rpsP; 30S ribosomal protein S16 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpsP; 30S ribosomal protein S16
Displaying items 1-30 of 31 in total

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