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SCNpilot_cont_300_bf_scaffold_1986

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1986_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..828)
DNA (828bp) protein (276aa)
Topoisomerase IB n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM48_9RHIZ
Topoisomerase IB {ECO:0000313|EMBL:EIM25040.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
topB; type IB DNA topoisomerase
SCNpilot_cont_300_bf_scaffold_1986_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(879..1196)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SKF2_9RHIZ
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1986_3
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1277..2212)
DNA (936bp) protein (312aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase {ECO:0000313|EMBL:BAQ16868.1}; EC=4.6.1.1 {ECO:0000313|EMBL:BAQ16868.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" sou
Putative adenylate/guanylate cyclase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M631_RHIL3 rbh
SCNpilot_cont_300_bf_scaffold_1986_4
unknown

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2367..2546
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1986_5
unknown

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2723..3013
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1986_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3706..4086)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL22 RepID=U9GY96_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40369.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_1986_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4162..4479
DNA (318bp) protein (106aa)
Transcriptional regulator, HxlR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XBK8_VARPD
transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AGU49871.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
SCNpilot_cont_300_bf_scaffold_1986_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4467..5516)
DNA (1050bp) protein (350aa)
Putative Allophanate hydrolase, subunit 2 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCK4_AZOL4
allophanate hydrolase
Allophanate hydrolase {ECO:0000313|EMBL:AIB13677.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasile
SCNpilot_cont_300_bf_scaffold_1986_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5513..6163)
DNA (651bp) protein (217aa)
Putative Allophanate hydrolase, subunit 1 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDC3_AZOL4
putative Allophanate hydrolase, subunit 1
Putative Allophanate hydrolase, subunit 1 {ECO:0000313|EMBL:CBS89438.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sourc
SCNpilot_cont_300_bf_scaffold_1986_10
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6289..7083
DNA (795bp) protein (265aa)
UPF0271 protein BAL199_26332 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV25_9PROT
UPF0271 protein BAL199_26332 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative Allophanate hydrolase, subunit 2 (modular protein)
SCNpilot_cont_300_bf_scaffold_1986_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7159..9456
DNA (2298bp) protein (766aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132Q3_RHOPS
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KGM34560.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus
SCNpilot_cont_300_bf_scaffold_1986_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9530..10774
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI000378914A
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1986_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11125..11718
DNA (594bp) protein (198aa)
molybdopterin oxidoreductase Fe4S4 region; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
molybdopterin oxidoreductase n=1 Tax=Dyella japonica RepID=UPI0002E65991
sulfate ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1986_14
unknown

Not on your lists

comp(12243..12494)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1986_15
unknown

Not on your lists

comp(12735..12878)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1986_16
unknown

Not on your lists

comp(12918..13091)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1986_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13898..14158
DNA (261bp) protein (87aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
formate dehydrogenase n=1 Tax=Methyloferula stellata RepID=UPI000381B83E
formate dehydrogenase subunit alpha
SCNpilot_cont_300_bf_scaffold_1986_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14176..15078
DNA (903bp) protein (301aa)
formate dehydrogenase-N subunit beta n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037975E9
formate dehydrogenase-O iron-sulfur subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
formate dehydrogenase-O iron-sulfur subunit
SCNpilot_cont_300_bf_scaffold_1986_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15075..15704
DNA (630bp) protein (210aa)
Formate dehydrogenase, gamma subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID19_XANP2
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
formate dehydrogenase subunit gamma
SCNpilot_cont_300_bf_scaffold_1986_20
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15674..16618
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000308FB61
formate dehydrogenase
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_1986_21
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..18212
DNA (1317bp) protein (439aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
selenocysteine synthase (EC:2.9.1.1)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037FC1F8 rbh
SCNpilot_cont_300_bf_scaffold_1986_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18292..19023
DNA (732bp) protein (244aa)
UPI0003CDD22B related cluster n=1 Tax=unknown RepID=UPI0003CDD22B
Uncharacterized protein {ECO:0000313|EMBL:ESW80446.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Sel1 repeat-containing protein
SCNpilot_cont_300_bf_scaffold_1986_23
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19020..19424
DNA (405bp) protein (135aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IBV8_9RHIZ
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EPE96693.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
selB_[H]; Selenocysteine-specific translation elongation factor
Displaying 23 items

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