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SCNpilot_cont_300_bf_scaffold_477

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_477_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286..2040
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4M9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57182.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
SCNpilot_cont_300_bf_scaffold_477_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2193..2525
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHU4_RHOPX
sterol desaturase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_477_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2515..3225)
DNA (711bp) protein (237aa)
Sulfurtransferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNV4_RHISN rbh
ArsR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ArsR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_477_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3293..4504
DNA (1212bp) protein (404aa)
Putative tetracycline resistance protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UW48_9RHIZ
MFS permease Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MFS permease
SCNpilot_cont_300_bf_scaffold_477_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4513..5067
DNA (555bp) protein (185aa)
Putative Sterol desaturase n=1 Tax=uncultured organism RepID=Q1EI10_9ZZZZ
fatty acid hydroxylase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
sterol desaturase-like protein
SCNpilot_cont_300_bf_scaffold_477_6
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5084..5995
DNA (912bp) protein (304aa)
integrase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000367892F rbh
integrase
Integrase {ECO:0000313|EMBL:AJD52996.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M
SCNpilot_cont_300_bf_scaffold_477_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6013..6336
DNA (324bp) protein (108aa)
Fatty acid hydroxylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IYG8_9PROT
fatty acid hydroxylase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative Sterol desaturase-related protein
SCNpilot_cont_300_bf_scaffold_477_8
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6800..7165)
DNA (366bp) protein (122aa)
Isrso18-transposase protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XYQ4_RALSO
tISRso18; ISRSO18-transposase
Isrso18-transposase protein {ECO:0000313|EMBL:CAD15406.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanac
SCNpilot_cont_300_bf_scaffold_477_9
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7391..7639
DNA (249bp) protein (83aa)
camphor resistance protein CrcB n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000369B3AF
CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
SCNpilot_cont_300_bf_scaffold_477_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7858..8586
DNA (729bp) protein (243aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Me
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036B19D9
hypothetical protein
SCNpilot_cont_300_bf_scaffold_477_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8659..10674)
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003751D09
PA-phosphatase {ECO:0000313|EMBL:GAO35504.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
phosphoesterase, PA-phosphatase-like protein rbh
SCNpilot_cont_300_bf_scaffold_477_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10782..11189
DNA (408bp) protein (136aa)
Cupin 2 protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XR8_RHOFD
cupin 2 protein
Cupin 2 protein {ECO:0000313|EMBL:ABD69435.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax
SCNpilot_cont_300_bf_scaffold_477_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11466..12065
DNA (600bp) protein (200aa)
Integrase, catalytic domain protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETP0_BRASB
integrase catalytic subunit
Integrase, catalytic domain protein {ECO:0000313|EMBL:ABQ39534.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
SCNpilot_cont_300_bf_scaffold_477_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12359..15553)
DNA (3195bp) protein (1065aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036C79A1 rbh
Cation efflux system protein CzcA {ECO:0000313|EMBL:CEG10553.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
multidrug ABC transporter
SCNpilot_cont_300_bf_scaffold_477_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15550..16653)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P5_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CEG10552.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
hypothetical protein
SCNpilot_cont_300_bf_scaffold_477_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16640..17914)
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P6_9BRAD
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI52926.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_477_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17924..18556)
DNA (633bp) protein (211aa)
ChrB domain-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P7_9BRAD
ChrB domain-containing protein {ECO:0000313|EMBL:EFI52927.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ChrB domain-containing protein
SCNpilot_cont_300_bf_scaffold_477_18
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18962..19195
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037B9D67
Putative uncharacterized protein {ECO:0000313|EMBL:EHR00897.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
SCNpilot_cont_300_bf_scaffold_477_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19343..19717)
DNA (375bp) protein (125aa)
ISSpo2, transposase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TY37_9PROT
ISSpo2, transposase {ECO:0000313|EMBL:EDP62667.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
IS1380 family transposase
SCNpilot_cont_300_bf_scaffold_477_20
unknown

Not on your lists

19788..19985
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_477_21
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20393..21355)
DNA (963bp) protein (321aa)
copper resistance protein CopB n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57DD0
Copper resistance protein CopB {ECO:0000313|EMBL:KFL46262.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
copper resistance protein CopB
SCNpilot_cont_300_bf_scaffold_477_22
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21352..23067)
DNA (1716bp) protein (572aa)
Copper-resistance protein CopA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV18_SPHAL
copper-resistance protein CopA
Copper-resistance protein CopA {ECO:0000313|EMBL:ABF52504.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.
SCNpilot_cont_300_bf_scaffold_477_23
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(23176..23751)
DNA (576bp) protein (192aa)
FecI sigma-24 factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E8E
FecI sigma-24 factor {ECO:0000313|EMBL:KIJ72444.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
RNA polymerase ECF-type sigma factor
SCNpilot_cont_300_bf_scaffold_477_24
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23741..24178)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E8F
Heavy metal resistance protein {ECO:0000313|EMBL:EXS70675.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
heavy metal resistance protein
SCNpilot_cont_300_bf_scaffold_477_25
unknown

Not on your lists

comp(24175..24453)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_477_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24658..24909
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GXW8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AID31579.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
hypothetical protein
SCNpilot_cont_300_bf_scaffold_477_27
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25179..26456)
DNA (1278bp) protein (426aa)
Putative nodulin-related protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EHU3_BRASB
nodulin-like protein
Putative nodulin-related protein {ECO:0000313|EMBL:ABQ35737.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
SCNpilot_cont_300_bf_scaffold_477_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26664..28550)
DNA (1887bp) protein (629aa)
Putative adenylate cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A565_RHIFH
putative adenylate/guanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative adenylate cyclase
SCNpilot_cont_300_bf_scaffold_477_29
unknown

Not on your lists

comp(28566..28688)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_477_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28955..29605)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N3F5_9PSED
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
Displaying items 1-30 of 79 in total

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