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SCNpilot_cont_300_bf_scaffold_637

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_637_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66..1679)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035D847C
short-chain amide or branched-chain amino acid ABC transporter; permease component Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
urea ABC transporter permease
SCNpilot_cont_300_bf_scaffold_637_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..3083)
DNA (1296bp) protein (432aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYS4_AZOS1 rbh
livK; branched-chain amino acid transport system substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_
livK; branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_300_bf_scaffold_637_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3177..3755)
DNA (579bp) protein (193aa)
Hydrogenase/urease accessory protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AR25_9BACT
Hydrogenase/urease accessory protein {ECO:0000313|EMBL:EIP97466.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacteri
Ni/Fe hydrogenase
SCNpilot_cont_300_bf_scaffold_637_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3797..4423)
DNA (627bp) protein (209aa)
Urease accessory protein UreG n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TAH5_9GAMM rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hy
urease accessory protein UreG
SCNpilot_cont_300_bf_scaffold_637_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4420..4848)
DNA (429bp) protein (143aa)
UPI0003CE89D9 related cluster n=1 Tax=unknown RepID=UPI0003CE89D9
Uncharacterized protein {ECO:0000313|EMBL:ESX63924.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_637_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4845..5630)
DNA (786bp) protein (262aa)
Urease accessory protein UreF n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQS2_SORCE
hypothetical protein
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="S
SCNpilot_cont_300_bf_scaffold_637_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5623..6111)
DNA (489bp) protein (163aa)
Urease accessory protein UreE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWY3_9PROT
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..7103)
DNA (990bp) protein (330aa)
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01953};; Urea amidohydrolase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; TaxID=266779 species="Bacter
Urease subunit alpha n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=URE1_MESSB
SCNpilot_cont_300_bf_scaffold_637_9
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8096..8398)
DNA (303bp) protein (101aa)
urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GND1_9PROT
ureA; urease, gamma subunit Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_300_bf_scaffold_637_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8526..9377)
DNA (852bp) protein (284aa)
Urease accessory protein UreD n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWP8_AZOS1
ureD; urease accessory protein UreD Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ureD; Urease accessory protein ureD
SCNpilot_cont_300_bf_scaffold_637_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9408..9959
DNA (552bp) protein (184aa)
Transcription elongation factor GreB n=39 Tax=Bordetella RepID=F4LG74_BORPC
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
greB; transcription elongation factor GreB
SCNpilot_cont_300_bf_scaffold_637_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10091..11398
DNA (1308bp) protein (436aa)
gluconolactonase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003741106 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44708.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
gluconolactonase
SCNpilot_cont_300_bf_scaffold_637_13

Not on your lists

comp(11395..12795)
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 162 RepID=E3T770_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36164.1}; TaxID=698381 species="Bacteria; environmental samples.;" source="uncultured bacterium 162.;"
ankyrin repeat-containing protein
SCNpilot_cont_300_bf_scaffold_637_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12922..14181)
DNA (1260bp) protein (420aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2); K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ20_9BRAD
SCNpilot_cont_300_bf_scaffold_637_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..14749)
DNA (564bp) protein (188aa)
pcaG_1; protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J2WLP1_9PSED
protocatechuate 3,4-dioxygenase
SCNpilot_cont_300_bf_scaffold_637_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14746..15450)
DNA (705bp) protein (235aa)
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Pseudomonas mandelii RepID=UPI0003603E4B
protocatechuate 3,4-dioxygenase subunit beta
SCNpilot_cont_300_bf_scaffold_637_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15483..17027)
DNA (1545bp) protein (515aa)
Sulfatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRT8_9PROT rbh
putative sulfatase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative sulfatase
SCNpilot_cont_300_bf_scaffold_637_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17100..18131
DNA (1032bp) protein (344aa)
2-ketogluconate reductase (EC:1.1.1.215); K00090 gluconate 2-dehydrogenase [EC:1.1.1.215] Tax=GWA2_Rokubacteria_73_35_curated
Blr7063 protein id=4911277 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18128..18325)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_20
unknown

Not on your lists

19125..19427
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_637_21
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19467..20507
DNA (1041bp) protein (347aa)
Hypothethical protein n=1 Tax=Ralstonia solanacearum RepID=D8N2J3_RALSL
hypothetical protein
Hypothethical protein {ECO:0000313|EMBL:CBJ35859.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Ps
SCNpilot_cont_300_bf_scaffold_637_22
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20494..21675
DNA (1182bp) protein (394aa)
Radical SAM domain containing protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JNY0_STREN
Putative arylsulfatase regulatory protein {ECO:0000313|EMBL:KIG16844.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
radical SAM domain containing protein
SCNpilot_cont_300_bf_scaffold_637_23
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21672..22757
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QWT3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK24814.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_300_bf_scaffold_637_24
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22767..23969
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLN5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KFA94087.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23959..25389
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUE8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36842.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_637_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25386..26363)
DNA (978bp) protein (326aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZU9_9BRAD rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26360..28255)
DNA (1896bp) protein (632aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F2D454 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43967.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_637_28
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28267..29286)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DE16_BRAJP rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC46023.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29395..30108
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DCA94C rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF83353.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
GntR domain-containing protein
SCNpilot_cont_300_bf_scaffold_637_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30121..31647)
DNA (1527bp) protein (509aa)
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase {ECO:0000313|EMBL:ACS20611.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ACS20611.1};; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
alkaline phosphatase n=1 Tax=Variovorax paradoxus RepID=UPI0003729EFC rbh
Displaying items 1-30 of 36 in total

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