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SCNpilot_cont_300_bf_scaffold_757

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_757_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128..847
DNA (720bp) protein (240aa)
ABC-type Co2+ transport system, periplasmic component n=1 Tax=Herbaspirillum sp. YR522 RepID=J2W7F3_9BURK
ABC-type Co2+ transport system, periplasmic component {ECO:0000313|EMBL:EZP41997.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacte
cobalt ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_757_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(864..2690)
DNA (1827bp) protein (609aa)
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-)
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMP7_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_757_3
Takifugu rubripes, Takifugu, Tetraodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

2839..3591
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Takifugu rubripes RepID=H2SYR0_TAKRU
Uncharacterized protein {ECO:0000313|Ensembl:ENSTRUP00000017548}; TaxID=31033 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neotele
signal peptide
SCNpilot_cont_300_bf_scaffold_757_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3612..4868
DNA (1257bp) protein (419aa)
aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Aminotransferase n=2 Tax=Rhodospirillum rubrum RepID=G2TF97_RHORU
aminotransferase
SCNpilot_cont_300_bf_scaffold_757_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4894..6186
DNA (1293bp) protein (431aa)
Homoserine dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMF0_9PROT rbh
homoserine dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
homoserine dehydrogenase
SCNpilot_cont_300_bf_scaffold_757_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6223..7209
DNA (987bp) protein (329aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMP3_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_757_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7288..8853)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037E291D rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40903.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_757_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8911..9870)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003773896 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31262.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
polysaccharide deacetylase
SCNpilot_cont_300_bf_scaffold_757_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9967..11787
DNA (1821bp) protein (607aa)
single-stranded DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Single-stranded-DNA-specific exonuclease recJ n=1 Tax=Oceanibaculum indicum P24 RepID=K2KE50_9PROT rbh
single-stranded DNA exonuclease
SCNpilot_cont_300_bf_scaffold_757_10
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11976..12470
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI0003716A14
integrase
Whole genome shotgun sequence {ECO:0000313|EMBL:KIT36190.1}; Flags: Fragment;; TaxID=1288779 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio
SCNpilot_cont_300_bf_scaffold_757_11
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12480..13550
DNA (1071bp) protein (357aa)
Phage integrase n=2 Tax=Rhodospirillum rubrum RepID=Q2RP35_RHORT
phage integrase
Phage integrase {ECO:0000313|EMBL:ABC24110.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum
SCNpilot_cont_300_bf_scaffold_757_12
unknown

Not on your lists

13567..13935
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_13
unknown

Not on your lists

14042..14479
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_14
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..16199
DNA (1683bp) protein (561aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VRP1_ALCBS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL16157.1}; TaxID=393595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax bork
SCNpilot_cont_300_bf_scaffold_757_15
Rhizobium phage RHEph01, Caudovirales, Viruses

Not on your lists

comp(16857..17036)
DNA (180bp) protein (60aa)
Putative internal virion protein {ECO:0000313|EMBL:AGC35554.1}; TaxID=1220601 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Rhizobium phage RHEph01.;"
SCNpilot_cont_300_bf_scaffold_757_16
unknown

Not on your lists

comp(17099..17386)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_17
unknown

Not on your lists

comp(17696..17947)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_18
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17972..18646)
DNA (675bp) protein (225aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q532_9SPHN
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EJL35297.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
resolvase domain-containing protein
SCNpilot_cont_300_bf_scaffold_757_19
unknown

Not on your lists

18878..19165
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_20
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19557..20474
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000377FCE8
Uncharacterized protein {ECO:0000313|EMBL:ESS70441.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
hypothetical protein
SCNpilot_cont_300_bf_scaffold_757_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20776..21933
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDH4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF82516.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
beta-lactamase
SCNpilot_cont_300_bf_scaffold_757_22
unknown

Not on your lists

22470..22577
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_757_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23156..23947
DNA (792bp) protein (264aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative two-component response regulator
SCNpilot_cont_300_bf_scaffold_757_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24168..25112
DNA (945bp) protein (315aa)
Sensor histidine kinase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMA8_TISMK
sensor histidine kinase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
chvG; sensor histidine kinase
SCNpilot_cont_300_bf_scaffold_757_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25253..27553
DNA (2301bp) protein (767aa)
Succinoglycan biosynthesis transport protein exoP n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4B2_9PROT
exoP; succinoglycan biosynthesis transport protein ExoP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
succinoglycan biosynthesis transport protein exoP
SCNpilot_cont_300_bf_scaffold_757_26
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27629..28522
DNA (894bp) protein (298aa)
Putative insertion sequence transposase protein, IS66 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELE1_BRASB
IS66 family insertion sequence transposase protein
Hypothetical 61.7 kDa protein y4HP {ECO:0000313|EMBL:GAJ37423.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
SCNpilot_cont_300_bf_scaffold_757_27
bacterium YEK0313, Bacteria

Not on your lists

28642..29163
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZSE7_RHILW
Uncharacterized protein {ECO:0000313|EMBL:CEJ14632.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
GCN5-related N-acetyltransferase protein
SCNpilot_cont_300_bf_scaffold_757_28
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29778..30182)
DNA (405bp) protein (135aa)
bacteriophytochrome (EC:2.7.3.-) Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6BDE4
Putative response regulator receiver (CheY-like protein)
SCNpilot_cont_300_bf_scaffold_757_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30179..31594)
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1G2_9PROT
Putative uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_757_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31862..32605
DNA (744bp) protein (248aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
response regulator
Displaying items 1-30 of 45 in total

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