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SCNpilot_cont_300_bf_scaffold_987

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_987_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166..1119
DNA (954bp) protein (318aa)
Bll7861 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CD6_BRADU rbh
rhizopine catabolism protein
Putative rhizopine catabolism protein {ECO:0000313|EMBL:BAR55254.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
SCNpilot_cont_300_bf_scaffold_987_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1058..1648)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E85A83
Transcriptional regulator {ECO:0000313|EMBL:KIZ33038.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_987_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2148..4244
DNA (2097bp) protein (699aa)
Elongation factor G n=1 Tax=Oceanibaculum indicum P24 RepID=K2IU57_9PROT rbh
efp; elongation factor G; K02355 elongation factor G Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fusA; elongation factor EF-G
SCNpilot_cont_300_bf_scaffold_987_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4441..4563
DNA (123bp) protein (41aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_987_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4836..5375
DNA (540bp) protein (180aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_987_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..5920
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y259_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
membrane protein
SCNpilot_cont_300_bf_scaffold_987_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6000..6974
DNA (975bp) protein (325aa)
Dihydroxyacid dehydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQS5_9PROT rbh
putative sulfite oxidase subunit YedY; K07147 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative sulfite oxidase subunit YedY
SCNpilot_cont_300_bf_scaffold_987_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7083..8054
DNA (972bp) protein (324aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
TctC {ECO:0000313|EMBL:EHN66282.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_987_9
unknown

Not on your lists

comp(7988..8371)
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_987_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..8801
DNA (336bp) protein (112aa)
ysiB; enoyl-CoA hydratase/isomerase family protein; K13767 enoyl-CoA hydratase [EC:4.2.1.17] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Enoyl-CoA hydratase/isomerase id=4803142 bin=GWC2_Methylomirabilis_70_16 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase/isomerase family protein
SCNpilot_cont_300_bf_scaffold_987_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8806..9180
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CB52B
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_987_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..10429
DNA (1167bp) protein (389aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00036328B1
putative acyl-CoA dehydrogenase YngJ
SCNpilot_cont_300_bf_scaffold_987_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10426..11583
DNA (1158bp) protein (386aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZRR2_9ACTO rbh
L-carnitine dehydratase/bile acid-inducible protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_300_bf_scaffold_987_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11716..12594)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_987_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13002..13892)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H8X0_9PROT rbh
transcriptional regulator, LysR family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative transcriptional regulatory protein, LysR family
SCNpilot_cont_300_bf_scaffold_987_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13920..14891)
DNA (972bp) protein (324aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9) rbh
Thioredoxin reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI4_RHOCS rbh
trxB; thioredoxin reductase, FAD/NAD(P)-binding Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_987_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15069..15545
DNA (477bp) protein (159aa)
Transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9K6_MAGSA
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_987_18

Not on your lists

comp(15567..15989)
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
PilT protein domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP49_XANP2
PilT domain-containing protein
SCNpilot_cont_300_bf_scaffold_987_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15989..16291)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QFE6_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC29514.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_987_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16442..17017
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRA2_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative intracellular septation protein
SCNpilot_cont_300_bf_scaffold_987_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17038..17511)
DNA (474bp) protein (158aa)
transcription elongation factor GreA n=1 Tax=Novispirillum itersonii RepID=UPI0003655E4F
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
greA; transcription elongation factor GreA
SCNpilot_cont_300_bf_scaffold_987_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17605..20850)
DNA (3246bp) protein (1082aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2F5_AZOL4 rbh
carB; carbamoyl phosphate synthase, large subunit
SCNpilot_cont_300_bf_scaffold_987_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20858..22042)
DNA (1185bp) protein (395aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INY3_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_987_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22247..22702
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZSK7_9PROT
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_987_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22730..23107
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3B3_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT80994.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
SCNpilot_cont_300_bf_scaffold_987_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23317..25197
DNA (1881bp) protein (627aa)
DNA primase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MM70_9PROT rbh
dnaG; DNA primase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
DNA primase
SCNpilot_cont_300_bf_scaffold_987_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25375..27408
DNA (2034bp) protein (678aa)
RNA polymerase sigma factor RpoD n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H8N4_9PROT rbh
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
RNA polymerase sigma factor RpoD
SCNpilot_cont_300_bf_scaffold_987_28
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27631..28011
DNA (381bp) protein (127aa)
Hly-III-like protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TV96_PHAFV
Hly-III-like protein {ECO:0000313|EMBL:EPY02385.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum
Hly-III family protein
SCNpilot_cont_300_bf_scaffold_987_29
unknown

Not on your lists

comp(28044..28346)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_987_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28444..29097)
DNA (654bp) protein (218aa)
Glutathione S-transferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPH6_9RHIZ rbh
Glutathione S-transferase {ECO:0000313|EMBL:EHK57348.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium a
glutathione S-transferase
Displaying items 1-30 of 36 in total

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