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SCNpilot_cont_300_bf_scaffold_993

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_993_1
unknown

Not on your lists

403..1017
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_993_2
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1074..1451
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F3B243
Uncharacterized protein {ECO:0000313|EMBL:KHD19487.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
hypothetical protein
SCNpilot_cont_300_bf_scaffold_993_3
unknown

Not on your lists

1491..2240
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_993_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2522..2989
DNA (468bp) protein (156aa)
peptide-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003618850
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20017.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_cont_300_bf_scaffold_993_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2993..3832)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IR26_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL56728.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_cont_300_bf_scaffold_993_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3920..5242
DNA (1323bp) protein (441aa)
guaD; guanine deaminase; K01487 guanine deaminase [EC:3.5.4.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEB9_9GAMM
guaD; guanine deaminase
SCNpilot_cont_300_bf_scaffold_993_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5525..6250
DNA (726bp) protein (242aa)
Putative phosphate starvation-inducible protein with ATPase activity, PhoH-like protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LI29_9PROT rbh
phosphate starvation-inducible protein PhoH, ATPase; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative enzyme with nucleoside triphosphate hydrolase domain
SCNpilot_cont_300_bf_scaffold_993_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6611..8440
DNA (1830bp) protein (610aa)
UvrABC system protein C n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AM02_AZOBR rbh
uvrC; excinuclease ABC subunit C Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
excinuclease ABC subunit C
SCNpilot_cont_300_bf_scaffold_993_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8453..9022
DNA (570bp) protein (190aa)
phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Phosphatidylglycerophosphate synthase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A6J7_9PROT
phosphatidylglycerophosphate synthase
SCNpilot_cont_300_bf_scaffold_993_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..9270
DNA (252bp) protein (84aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6F814
molybdopterin converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
molybdopterin converting factor subunit 1
SCNpilot_cont_300_bf_scaffold_993_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9275..9748
DNA (474bp) protein (158aa)
Molybdenum cofactor biosynthesis protein E n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALZ7_AZOBR
moaE; molybdenum cofactor biosynthesis protein E Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
moaE; molybdenum cofactor biosynthesis protein E
SCNpilot_cont_300_bf_scaffold_993_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9770..11284)
DNA (1515bp) protein (505aa)
Amidase {ECO:0000313|EMBL:ETW97304.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ETW97304.1};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus E
amidase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000365AC65 rbh
amidase
SCNpilot_cont_300_bf_scaffold_993_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11330..12031)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035F1F23
ABC transporter ATP-binding protein
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49774.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
SCNpilot_cont_300_bf_scaffold_993_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12024..12758)
DNA (735bp) protein (245aa)
ABC transporter related protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDE5_RHOPX rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJB93351.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Ske
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_993_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12764..13795)
DNA (1032bp) protein (344aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000370612F rbh
ABC transporter permease {ECO:0000313|EMBL:KJB93350.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_993_16

Not on your lists

comp(13819..15048)
DNA (1230bp) protein (410aa)
Putative amide-urea binding protein n=1 Tax=uncultured bacterium RepID=E2RVE5_9BACT rbh
Putative amide-urea binding protein {ECO:0000313|EMBL:BAJ23966.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_993_17

Not on your lists

comp(15051..15908)
DNA (858bp) protein (286aa)
Putative inner-membrane translocator n=1 Tax=uncultured bacterium RepID=E2RVE4_9BACT rbh
Putative inner-membrane translocator {ECO:0000313|EMBL:BAJ23965.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_993_18
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16032..17045)
DNA (1014bp) protein (338aa)
Putative ABC transporter, substrate binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THX2_9BRAD rbh
Putative ABC transporter, substrate binding protein {ECO:0000313|EMBL:CCE06060.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
nitrile hydratase regulator
SCNpilot_cont_300_bf_scaffold_993_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17395..17850
DNA (456bp) protein (152aa)
Regulatory protein MarR n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDD9_RHOPX
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:ADU42774.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_993_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17872..18831)
DNA (960bp) protein (320aa)
UBA/ThiF-type NAD/FAD binding protein ThiF (EC:2.7.7.-)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3Y3_9RHIZ
thiF; thiamine biosynthesis protein ThiF Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_993_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18844..19446)
DNA (603bp) protein (201aa)
thiE-2; thiamine-phosphate pyrophosphorylase 2 (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ29_9GAMM
thiE1; thiamine-phosphate pyrophosphorylase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_993_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19468..20241)
DNA (774bp) protein (258aa)
Thiazole synthase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4N3_STAND rbh
thiazole biosynthesis protein; K03149 thiamine biosynthesis ThiG Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
thiazole biosynthesis protein
SCNpilot_cont_300_bf_scaffold_993_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20244..20441)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VGB8_9PROT
thiS; thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
thiS; thiamine biosynthesis protein ThiS
SCNpilot_cont_300_bf_scaffold_993_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20410..21447)
DNA (1038bp) protein (346aa)
glycine oxidase ThiO; K03153 glycine oxidase [EC:1.4.3.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
thiO; glycine oxidase ThiO (EC:1.4.3.19)
Glycine oxidase ThiO n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3X9_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_993_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21573..22505)
DNA (933bp) protein (311aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase (EC:2.6.1.-)
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL48_RHOPH
SCNpilot_cont_300_bf_scaffold_993_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22683..23321)
DNA (639bp) protein (213aa)
glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glutathione S-transferase, C-terminal domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XEN9_9BURK rbh
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_993_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..23921
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U0Z5_9PROT
petP; MarR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
petP; HTH-type transcriptional regulator petP
SCNpilot_cont_300_bf_scaffold_993_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23927..24634
DNA (708bp) protein (236aa)
Response regulator receiver n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL09_AZOC5
ompR; transcriptional regulatory protein OmpR; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ompR; Two-component transcriptional regulator (HTH DNA binding domain:CheY-like receiver)
SCNpilot_cont_300_bf_scaffold_993_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24631..25635
DNA (1005bp) protein (335aa)
sensor histidine kinase (EC:2.7.3.-); K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Signal tranduction histidine kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4T2_AZOL4
Signal tranduction histidine kinase
SCNpilot_cont_300_bf_scaffold_993_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25656..25931
DNA (276bp) protein (92aa)
sensor histidine kinase (EC:2.7.3.-); K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM48_METSB
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 36 in total

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