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SCNpilot_cont_300_bf_scaffold_2060

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2060_1
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1037)
DNA (1035bp) protein (345aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZF6_HYPNA rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ46082.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-
acyl-CoA dehydrogenase family protein
SCNpilot_cont_300_bf_scaffold_2060_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1215..2120)
DNA (906bp) protein (302aa)
glyoxalase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028A2CFE
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Betaproteobacteria_66_20_curated
glyoxalase-like domain protein
SCNpilot_cont_300_bf_scaffold_2060_3
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2289..3044)
DNA (756bp) protein (252aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFZ13365.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFZ13365.1};; Flags: Precursor;; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatorioph
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W1R0_9CYAN
SCNpilot_cont_300_bf_scaffold_2060_4

Not on your lists

comp(3054..3803)
DNA (750bp) protein (250aa)
short-chain dehydrogenase (EC:1.1.1.-)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=uncultured Chloroflexi bacterium HF4000_28F02 RepID=E0XW94_9CHLR
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:ADI18685.1}; TaxID=710739 species="Bacteria; Chloroflexi; environmental samples.;" source=
SCNpilot_cont_300_bf_scaffold_2060_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3800..4663)
DNA (864bp) protein (288aa)
Binding-protein-dependent transport system inner membrane protein id=4051065 bin=GWF2_Methylomirabilis_70_14 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter related protein; K02050 NitT/TauT family transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2060_6
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4660..5424)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE51705.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
ABC transporter related protein id=4051063 bin=GWF2_Methylomirabilis_70_14 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2060_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5429..6544)
DNA (1116bp) protein (372aa)
Luciferase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BY6_MESSB
luciferase-like protein
Luciferase-like protein {ECO:0000313|EMBL:ABG65089.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
SCNpilot_cont_300_bf_scaffold_2060_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6589..7605)
DNA (1017bp) protein (339aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=4051067 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2060_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7650..8858)
DNA (1209bp) protein (403aa)
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TX75_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25565.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_cont_300_bf_scaffold_2060_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8957..9808
DNA (852bp) protein (284aa)
Bacterial regulatory helix-turn-helix protein, LysR family protein 76 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPS3_ACHXA
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGY25045.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
SCNpilot_cont_300_bf_scaffold_2060_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9837..11096
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6F5_9BRAD rbh
putative transmembrane protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2060_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11500..11832
DNA (333bp) protein (111aa)
catD; beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
catD; beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Herbaspirillum sp. CF444 RepID=J2L2C4_9BURK
SCNpilot_cont_300_bf_scaffold_2060_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11952..13361
DNA (1410bp) protein (470aa)
adenylate cyclase protein (EC:4.6.1.1)
Family 3 adenylate cyclase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
cyaH; adenylate/guanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2060_14
unknown

Not on your lists

comp(13246..14295)
DNA (1050bp) protein (350aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2060_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14529..14837
DNA (309bp) protein (103aa)
Family 3 adenylate cyclase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
cyaH; adenylate/guanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cyaH; hypothetical protein
SCNpilot_cont_300_bf_scaffold_2060_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14884..15756)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QN33_NOSS7
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2060_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..16465)
DNA (687bp) protein (229aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein id=14426719 bin=bin1_lowGC species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2060_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16462..17229)
DNA (768bp) protein (256aa)
dehydrogenase oxidoreductase (EC:1.1.1.125)
Dehydrogenase oxidoreductase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CXM4_9BURK
short-chain dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2060_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17238..18149)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUJ2_AZOS1
aldose 1-epimerase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2060_20
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18280..19638
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000371C061
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
putative ABC transporter substrate binding protein
SCNpilot_cont_300_bf_scaffold_2060_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19709..20593
DNA (885bp) protein (295aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Clostridium ultunense Esp RepID=M1YQ16_9CLOT
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:CCQ92640.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
binding-protein-dependent transporters inner membrane component
SCNpilot_cont_300_bf_scaffold_2060_22
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20593..21480
DNA (888bp) protein (296aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R0Y0_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75560.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
SCNpilot_cont_300_bf_scaffold_2060_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21797..22582
DNA (786bp) protein (262aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
HpcH/HpaI aldolase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218C7_RHOPB
HpcH/HpaI aldolase
SCNpilot_cont_300_bf_scaffold_2060_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22601..23788
DNA (1188bp) protein (396aa)
N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034DBDDE
Displaying 24 items

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