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SCNpilot_cont_300_bf_scaffold_2085

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2085_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003618816
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2085_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294..713)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D365_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGT81027.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
SCNpilot_cont_300_bf_scaffold_2085_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(849..2045)
DNA (1197bp) protein (399aa)
transport protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative transport protein id=2763131 bin=GWC2_Syntrophus__56_31 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
transport protein
SCNpilot_cont_300_bf_scaffold_2085_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2117..2923
DNA (807bp) protein (269aa)
AraC family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMW5_9PROT
Transcriptional regulator, AraC family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2085_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3487..5298
DNA (1812bp) protein (604aa)
Putative glutamate synthase small subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW52_9PROT rbh
putative glutamate synthase small subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative glutamate synthase small subunit
SCNpilot_cont_300_bf_scaffold_2085_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5283..7124
DNA (1842bp) protein (614aa)
ferredoxin oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative ferredoxin oxidoreductase alpha subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW53_9PROT rbh
ferredoxin oxidoreductase subunit alpha
SCNpilot_cont_300_bf_scaffold_2085_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7121..8176
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Thiamine pyrophosphate enzyme domain protein TPP-binding n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBB7_SPHWW rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta
SCNpilot_cont_300_bf_scaffold_2085_8
unknown

Not on your lists

comp(8186..8677)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2085_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8747..9073)
DNA (327bp) protein (109aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Family 3 adenylate cyclase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UFM3_SPIAZ
family 3 adenylate cyclase
SCNpilot_cont_300_bf_scaffold_2085_10
unknown

Not on your lists

9269..10903
DNA (1635bp) protein (545aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2085_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10973..11470)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KE33_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2085_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..12114)
DNA (642bp) protein (214aa)
Putative transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMW2_9PROT
Transcriptional regulator, MerR family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2085_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12210..13136
DNA (927bp) protein (309aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2085_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..14834)
DNA (1716bp) protein (572aa)
ABC transporter domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4R4_STAND
ABC transporter; K02471 putative ATP-binding cassette transporter Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter
SCNpilot_cont_300_bf_scaffold_2085_15
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14865..16163)
DNA (1299bp) protein (433aa)
TrapT family, dctM subunit, C4-dicarboxylate transport n=2 Tax=Bradyrhizobium RepID=H0RVM7_9BRAD rbh
TRAP dicarboxylate transporter subunit DctM
TrapT family, dctM subunit, C4-dicarboxylate transport {ECO:0000313|EMBL:CCD92670.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobiu
SCNpilot_cont_300_bf_scaffold_2085_16
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16160..16666)
DNA (507bp) protein (169aa)
Putative TrapT family, dctQ subunit, C4-dicarboxylate transport n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T788_9BRAD
Putative TrapT family, dctQ subunit, C4-dicarboxylate transport {ECO:0000313|EMBL:CCE02315.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brad
TRAP C4-dicarboxylate transport system subunit DctQ
SCNpilot_cont_300_bf_scaffold_2085_17
unknown

Not on your lists

17169..17333
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2085_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17873..19165
DNA (1293bp) protein (431aa)
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPN2_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_2085_19
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19237..20262
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B5D8D rbh
C4-dicarboxylate ABC transporter
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:AJC21464.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pul
SCNpilot_cont_300_bf_scaffold_2085_20
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20259..20756
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000382AABC
TRAP-type C4-dicarboxylate transport system small permease {ECO:0000313|EMBL:EIJ47907.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbas
dctQ; TRAP-type C4-dicarboxylate transport system small permease
SCNpilot_cont_300_bf_scaffold_2085_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20759..20953
DNA (195bp) protein (65aa)
TRAP transporter, DctM subunit n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q8Z8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ30423.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
C4-dicarboxylate ABC transporter
SCNpilot_cont_300_bf_scaffold_2085_22
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20950..21945
DNA (996bp) protein (332aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKH6_METS4
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ACA20309.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
Displaying 22 items

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