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SCNpilot_cont_300_bf_scaffold_2230

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2230_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..331
DNA (330bp) protein (110aa)
hypothetical protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2230_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

328..900
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DG51_9PROT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_3
unknown

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1012..1731
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2230_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1806..2744
DNA (939bp) protein (313aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EKE72934.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EKE72934.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
D-cysteine desulfhydrase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR53_9PROT rbh
D-cysteine desulfhydrase
SCNpilot_cont_300_bf_scaffold_2230_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3134..4249
DNA (1116bp) protein (372aa)
MlrC family protein 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRP4_9PROT rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MlrC family protein 3
SCNpilot_cont_300_bf_scaffold_2230_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4296..5915)
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376589A rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACS22455.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_cont_300_bf_scaffold_2230_7
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5918..6781)
DNA (864bp) protein (288aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EQM34894.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EQM34894.1};; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030297FA rbh
SCNpilot_cont_300_bf_scaffold_2230_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6774..7442)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003133FEF
TetR family transcriptional regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_2230_9
unknown

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7774..8115
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2230_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8152..9030)
DNA (879bp) protein (293aa)
pirin; K06911 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Pirin-like protein id=3022940 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
pirin family protein
SCNpilot_cont_300_bf_scaffold_2230_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9408..10829
DNA (1422bp) protein (474aa)
peptidase M24 n=1 Tax=Rhizobium loti RepID=UPI00036D7EF6
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
peptidase, M23/M37 family
SCNpilot_cont_300_bf_scaffold_2230_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10971..12068
DNA (1098bp) protein (366aa)
Amino acid ABC transporter, substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALT4_AZOBR
aapJ; amino acid ABC transporter, substrate-binding component Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
aapJ; amino acid ABC transporter, substrate-binding component
SCNpilot_cont_300_bf_scaffold_2230_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13192..14112
DNA (921bp) protein (307aa)
General L-amino acid transport system substrate-binding protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LP35_9PROT
aapJ; amino acid ABC transporter, substrate-binding component Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
amino acid ABC transporter, substrate-binding component
Displaying 13 items

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