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SCNpilot_cont_300_bf_scaffold_2635

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2635_1
bacterium YEK0313, Bacteria

Not on your lists

1..834
DNA (834bp) protein (278aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD27_9RHOB
SCNpilot_cont_300_bf_scaffold_2635_2
bacterium YEK0313, Bacteria

Not on your lists

834..2729
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312CBB7
Bifunctional enzyme CysN/CysC {ECO:0000313|EMBL:CEJ16090.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
SCNpilot_cont_300_bf_scaffold_2635_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2822..3469
DNA (648bp) protein (216aa)
Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDE2_PHEZH
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region {ECO:0000313|EMBL:CDO59171.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobac
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_2635_4
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3421..4011
DNA (591bp) protein (197aa)
Acyl-CoA dehydrogenase n=1 Tax=Williamsia sp. D3 RepID=V8D2V3_9ACTO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETD33757.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2635_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..5040
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMG1_TISMK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2635_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5068..5754
DNA (687bp) protein (229aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JV32_9PROT rbh
hisB; imidazoleglycerol-phosphate dehydratase
SCNpilot_cont_300_bf_scaffold_2635_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5767..6420
DNA (654bp) protein (218aa)
hisH1; Imidazole glycerol phosphate synthase, HisH subunit; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYP0_AZOS1
hisH; amidotransferase
SCNpilot_cont_300_bf_scaffold_2635_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6485..6928
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI000367A377
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB14055.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
SCNpilot_cont_300_bf_scaffold_2635_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6960..7562)
DNA (603bp) protein (201aa)
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWA2_Rokubacteria_70_23_curated
3-isopropylmalate dehydratase small subunit id=2642972 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
leuD; alpha-IPM isomerase
SCNpilot_cont_300_bf_scaffold_2635_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7572..8975)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit id=2937753 bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
3-isopropylmalate dehydratase, large subunit
SCNpilot_cont_300_bf_scaffold_2635_11
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8988..9680)
DNA (693bp) protein (231aa)
Methylisocitrate lyase (EC:4.1.3.30)
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Variovorax paradoxus RepID=UPI000361E744
PrpB protein {ECO:0000313|EMBL:BAQ50063.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
SCNpilot_cont_300_bf_scaffold_2635_12
unknown

Not on your lists

comp(9686..9802)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2635_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9814..11304)
DNA (1491bp) protein (497aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP7_AZOBR
nitrate ABC transporter permease
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15861.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiril
SCNpilot_cont_300_bf_scaffold_2635_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11315..12088)
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP8_AZOBR
ABC transporter
ABC transporter {ECO:0000313|EMBL:CCD02657.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilens
SCNpilot_cont_300_bf_scaffold_2635_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12085..12360)
DNA (276bp) protein (92aa)
nitrate ABC transporter ATPase n=1 Tax=Elioraea tepidiphila RepID=UPI0003775FDC
ABC transporter Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
nitrate ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_2635_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..12875)
DNA (516bp) protein (172aa)
ABC transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IA69_AZOC5
nitrate ABC transporter ATPase
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:AIB15863.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillu
SCNpilot_cont_300_bf_scaffold_2635_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12872..13864)
DNA (993bp) protein (331aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0U4_9PROT
bacterial periplasmic substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
bacterial periplasmic substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2635_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13974..14969)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037F5DAA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative cobalamin synthesis protein
SCNpilot_cont_300_bf_scaffold_2635_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14962..15297)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1K9_9RHIZ
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2635_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15300..16181)
DNA (882bp) protein (294aa)
Cyclic imide hydrolase n=1 Tax=Pseudomonas putida RepID=Q4JG22_PSEPU
polysaccharide deacetylase family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
polysaccharide deacetylase family protein
SCNpilot_cont_300_bf_scaffold_2635_21
unknown

Not on your lists

16294..17013
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2635_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16982..18358)
DNA (1377bp) protein (459aa)
Paraquat-inducible protein A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVR5_GRABC rbh
paraquat-inducible protein A; K03808 paraquat-inducible protein A Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
paraquat-inducible protein A
SCNpilot_cont_300_bf_scaffold_2635_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18436..19026)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F6A6C7
hypothetical protein; K09857 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_2635_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19026..20699)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037022BD rbh
paraquat-inducible protein B; K06192 paraquat-inducible protein B Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
paraquat-inducible protein B
SCNpilot_cont_300_bf_scaffold_2635_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20738..23701)
DNA (2964bp) protein (988aa)
FtsK/SpoIIIE family, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6Z3_9RHOB rbh
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ftsK; DNA translocase FtsK
SCNpilot_cont_300_bf_scaffold_2635_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23717..24922)
DNA (1206bp) protein (402aa)
dapC; N-succinyldiaminopimelate aminotransferase (EC:2.6.1.17) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
dapC; N-succinyldiaminopimelate aminotransferase (EC:2.6.1.17)
N-succinyldiaminopimelate aminotransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5H0_AZOS1 rbh
SCNpilot_cont_300_bf_scaffold_2635_27
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25171..25809)
DNA (639bp) protein (213aa)
amidase n=1 Tax=Dyella japonica RepID=UPI0002F67152 rbh
amidase rbh
Amidase {ECO:0000313|EMBL:AIF48286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_2635_28
unknown

Not on your lists

comp(25806..26720)
DNA (915bp) protein (305aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2635_29
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26743..27645
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EC445
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB53965.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
LysR family transcriptional regulator
Displaying 29 items

View Taxonomy