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SCNpilot_cont_300_bf_scaffold_4004

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4004_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..365)
DNA (363bp) protein (121aa)
ccoO; cytochrome c oxidase, cbb3-type subunit II (EC:1.9.3.1); K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
peptidase S41 n=1 Tax=Elioraea tepidiphila RepID=UPI0003635675
cytO; cytochrome C oxidase, CytO subunit
SCNpilot_cont_300_bf_scaffold_4004_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376..1839)
DNA (1464bp) protein (488aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT16_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_4004_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2069..2734
DNA (666bp) protein (222aa)
Uncharacterized protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSX6_9PROT
conserved membrane protein of unknown function Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4004_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2709..2870)
DNA (162bp) protein (54aa)
hypothetical protein; K09792 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4004_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2873..3430)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMK7_9PROT
hypothetical protein; K09792 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_4004_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3494..4330
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E73A5
putative universal stress protein UspA-like Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative universal stress protein UspA
SCNpilot_cont_300_bf_scaffold_4004_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4348..5700
DNA (1353bp) protein (451aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylo
coproporphyrinogen III oxidase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003722678
oxygen-independent coproporphyrinogen III oxidase
SCNpilot_cont_300_bf_scaffold_4004_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5716..5931
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:CDO60656.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
SCNpilot_cont_300_bf_scaffold_4004_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6021..7589
DNA (1569bp) protein (523aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3); K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1P1_METEA
SCNpilot_cont_300_bf_scaffold_4004_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7579..8184
DNA (606bp) protein (202aa)
Two-component, nitrogen fixation regulatory protein fixJ n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIV4_MOBAS
fixJ; transcriptional regulator fixJ; K14987 two-component system, LuxR family, response regulator FixJ Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fixJ; transcriptional regulator fixJ
SCNpilot_cont_300_bf_scaffold_4004_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8191..8889)
DNA (699bp) protein (233aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4004_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9388..9591)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4004_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9652..10581)
DNA (930bp) protein (310aa)
TonB-dependent receptor, plug n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137U6_RHOPS
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABE39643.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
SCNpilot_cont_300_bf_scaffold_4004_14
unknown

Not on your lists

10927..11760
DNA (834bp) protein (278aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4004_15
bacterium YEK0313, Bacteria

Not on your lists

11700..12173
DNA (474bp) protein (158aa)
Putative nickel-responsive regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJE0_9RHOB
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
CopG family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4004_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12204..12542)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C2EA1
Uncharacterized protein {ECO:0000313|EMBL:KIZ40005.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4004_17
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12607..13224
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P147_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81861.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4004_18
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13208..14008
DNA (801bp) protein (267aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VHH5_9RHIZ
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJN05467.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Ph
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_4004_19
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14064..14939)
DNA (876bp) protein (292aa)
Acetolactate synthase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GKF8_9RHIZ
Acetolactate synthase {ECO:0000313|EMBL:ESZ42134.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L
thiamine pyrophosphate protein domain-containing protein
Displaying 19 items

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