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SCNpilot_cont_300_bf_scaffold_1188_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 1..150

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X6S4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 1.00e-07
putative Bug-like extra-cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 2.90e-08
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU48278.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 1.40e-07

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
ACCCTCGCCATTCCCGACGTCCAGGCCAGGCTGCGCGGCCTGGGCGGCGAGCCCGGCACCATGAGCGTCGAGGCTTTCACCCGGTTCAACGCCCAGGAGTACGAGCGCTTCGGGCGGCTGATCCGCGAAGCGAACATCAAGCCCGATTGA
PROTEIN sequence
Length: 50
TLAIPDVQARLRGLGGEPGTMSVEAFTRFNAQEYERFGRLIREANIKPD*