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SCNpilot_cont_300_bf_scaffold_1188

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1188_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..150
DNA (150bp) protein (50aa)
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X6S4_VARPD
putative Bug-like extra-cytoplasmic solute receptor, TTT family
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU48278.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
SCNpilot_cont_300_bf_scaffold_1188_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268..1476
DNA (1209bp) protein (403aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000306E0DA
major facilitator superfamily MFS_1 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_1188_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1636..3171
DNA (1536bp) protein (512aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=mine drainage metagenome RepID=E6PFF6_9ZZZZ rbh
major facilitator superfamily protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_1188_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3191..4129)
DNA (939bp) protein (313aa)
amidase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037E045E
Amidase {ECO:0000313|EMBL:EWY36434.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB2
amidase
SCNpilot_cont_300_bf_scaffold_1188_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4319..5188
DNA (870bp) protein (290aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFI3_9PROT
hypothetical protein; K07115 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1188_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5130..6383)
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BIP0_BURCM
putative transporter, MFS-type Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_1188_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6484..7338)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKJ7_AZOBR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1188_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7449..8579
DNA (1131bp) protein (377aa)
ABC transporter, permease protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT89_RHOCS
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1188_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..9373
DNA (795bp) protein (265aa)
D-methionine transport ATP-binding protein MetN n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT88_RHOCS
metN; D-methionine transport ATP-binding protein MetN; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
metN; D-methionine transport ATP-binding protein MetN
SCNpilot_cont_300_bf_scaffold_1188_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9386..10420
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037F9E86
hypothetical protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1188_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..11154
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035F2A3E
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
lipoprotein
SCNpilot_cont_300_bf_scaffold_1188_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11284..12348)
DNA (1065bp) protein (355aa)
aminoglycoside phosphotransferase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_1188_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12438..13997)
DNA (1560bp) protein (520aa)
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTP6_PARL1 rbh
long-chain-fatty-acid--CoA ligase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_1188_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14143..15114
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q609R3_METCA
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_1188_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15305..15733)
DNA (429bp) protein (143aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTS4_9BACT
NAD dependent epimerase/dehydratase family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_1188_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15762..16277)
DNA (516bp) protein (172aa)
gME-2; GDP-mannose 3,5-epimerase 2 (EC:5.1.3.18)
GDP-mannose 3,5-epimerase 2 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L5C9_SIMNZ
NAD dependent epimerase/dehydratase family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1188_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16592..17401
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000312FDC6
glycosyl transferase family 2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glycosyl transferase family 2
SCNpilot_cont_300_bf_scaffold_1188_18
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17398..19152
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036B9495 rbh
carbamoyl transferase, NodU family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
carbamoyl transferase, NodU family
SCNpilot_cont_300_bf_scaffold_1188_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19149..19613
DNA (465bp) protein (155aa)
isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16); K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Isoquinoline 1-oxidoreductase alpha subunit n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZCH6_9BRAD
isoquinoline 1-oxidoreductase alpha subunit
SCNpilot_cont_300_bf_scaffold_1188_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19610..21868
DNA (2259bp) protein (753aa)
Putative isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Acidovorax sp. NO-1 RepID=H0BY83_9BURK rbh
isoquinoline 1-oxidoreductase subunit beta Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
isoquinoline 1-oxidoreductase subunit beta
SCNpilot_cont_300_bf_scaffold_1188_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22157..23170
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000371E6EB rbh
Hopanoid-associated sugar epimerase {ECO:0000313|EMBL:EHL99652.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacterace
3-beta hydroxysteroid dehydrogenase/isomerase family protein
SCNpilot_cont_300_bf_scaffold_1188_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23167..24360
DNA (1194bp) protein (398aa)
Hopene-associated glycosyltransferase HpnB n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2F3_9PROT rbh
Hopene-associated glycosyltransferase HpnB {ECO:0000313|EMBL:EHL99651.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetoba
glycosyl transferase family 2 rbh
SCNpilot_cont_300_bf_scaffold_1188_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24371..25258
DNA (888bp) protein (296aa)
Squalene synthase HpnC (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2F2_9PROT rbh
Squalene synthase HpnC {ECO:0000313|EMBL:EHL99650.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobact
squalene synthase HpnC
SCNpilot_cont_300_bf_scaffold_1188_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25255..26100
DNA (846bp) protein (282aa)
Squalene synthase HpnD (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUF4_9PROT rbh
Squalene synthase HpnD {ECO:0000313|EMBL:EHM03398.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobact
squalene synthase HpnD
SCNpilot_cont_300_bf_scaffold_1188_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26097..27353
DNA (1257bp) protein (419aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUF3_9PROT rbh
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EHM03397.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Aceto
squalene-associated FAD-dependent desaturase
SCNpilot_cont_300_bf_scaffold_1188_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27430..29385
DNA (1956bp) protein (652aa)
Squalene-hopene cyclase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUF2_9PROT rbh
Squalene-hopene cyclase {ECO:0000313|EMBL:EHM03396.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source
squalene-hopene cyclase
SCNpilot_cont_300_bf_scaffold_1188_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29385..30080
DNA (696bp) protein (232aa)
Hopanoid-associated phosphorylase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUF1_9PROT
Hopanoid-associated phosphorylase {ECO:0000313|EMBL:EHM03395.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae
hopanoid-associated phosphorylase
SCNpilot_cont_300_bf_scaffold_1188_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30003..31151)
DNA (1149bp) protein (383aa)
radical SAM protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000363F41C rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EHM03394.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; uncla
hopanoid biosynthesis associated radical SAM protein HpnH
SCNpilot_cont_300_bf_scaffold_1188_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31163..32122)
DNA (960bp) protein (320aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUE9_9PROT rbh
SCNpilot_cont_300_bf_scaffold_1188_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32486..33301
DNA (816bp) protein (272aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 30 items

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