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SCNpilot_cont_300_bf_scaffold_1188_13

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(12438..13997)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTP6_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 518.0
  • Bit_score: 577
  • Evalue 1.30e-161
  • rbh
long-chain-fatty-acid--CoA ligase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 363.0
  • Bit_score: 630
  • Evalue 1.80e-177
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 518.0
  • Bit_score: 577
  • Evalue 3.70e-162

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGAGCGTAGGGATCACGGGCCTCGCGGACATCACCCGGCACCATGCCGCCCGGCAGCCGGACGTCGCCGCCCTCGTCTATCAGGGCCGGACGACGAGCTATGGCGCCCTCGACCGGGCCGCCTCCCGCGTCGCCAACGGCCTGATCGCCGAAGGGATCAAGCCCGGCGTACGGGTGGCCCATCTCGACAAGAGCAGCAACCTCTACTTCGAATTGCTGTTCGGCGCCGCCAAGGCCAATGCCGTCATGGTGTCGGTCAACTGGCGGCTGGCGGCGCCGGAGATCCTGTACATCCTGAACGACGCCGAGGCGGAGATCCTGTTCGTCGGCGAGGAATACTTTCCCGTCGTCGAGAAGATCCGCGACGAGCTCAAGACCGTCACCAAGATCGTGAGCCTGGATGCCCGCCACGGCGCCTGGCCCTCGTTCGACGAATGGCGGGACGGCTTTCCGGATACCGATCCGGGGTTACCGGTCCGCCCGGCCGACACCGCCGTCCAGTTCTACACCAGCGGCACCACCGGCCTGCCCAAGGGGGCCGAGCTCACCAACGCCAACTTCATGTTCACCTTCGAGCACTGGAGCCAGAGCTGGCTGATGAAGCCCGGCGTGACCACGATCGTCTGCCTGCCGATGTTCCATATCGGCGGCTCGGGCTGGGGCCTCGCCGGCCTCTATGCCGGCGCCACGAACCACGTCATGCGCGAGTTCGTGCCGGCCAACGTGCTGGCCACCATCGAGCGCGAGCGCATCGAGGTGATGCTGCTGGTGCCGGCGATGATCCTGTTCCTCGTGCAGGCGCCGCAGATCCACGAGACCGATCTCGGAAGCCTGAAGCTGATCGTCTACGGCGCCGCGCCGATTCCCGCGGCATTGCTGAAGCAGGCGATGTCGATCTTTCCCTGCGGCTTCCAGCAGGTTTACGGCCTCACCGAGACGACCGGCGCCATTACCCTGCTGCCCACCAAGGATCACGATCCGTCCGACGCCAGGAAGCTGCTGTCATGCGGTTTCGCGCATACCGGCGTCGAGCTGCGCATCGTCGACGATGCGGGCAAGGACCTGCCGGCAGGCGAGGTCGGCGAGATCGCCGTGCGCTCGCCGCAGGTCATGCACGGATACTGGCGGCTGCCGGACGCCACCAAGCGCGCGATCCACGGCGACTGGTTCTACACCGGCGACGCGGGCTATCTCGACGACAAGGGCTATCTCTTCATCTACGACCGCGTGAAGGACATGATCGTCTCCGGCGGCGAGAACATCTACCCGGCCGAGGTCGAGAGCGCCCTGTTCGGCCATCCGGCCGTGGCCGACGTCGCGGTGATCGGCGTGCCCGACGAGCGCTGGGGTGAAGCGGTCAAGGCCATCGTCGTGAAGAAGCCGGCCGCCGCGGTCACCGCGGGCGAGCTGATCGGCTGGGCCCGCGAACGCATCGCCGGCTACAAGCTGCCCAAGTCCGTCGACTTCATCGACGTCCTGCCGCGCAATCCCACCGGCAAGATCCTGAAGCGCGAGCTGCGCAAGCCCTACTGGGGCGACAAACAGCGCCAGATCAACTGA
PROTEIN sequence
Length: 520
MSVGITGLADITRHHAARQPDVAALVYQGRTTSYGALDRAASRVANGLIAEGIKPGVRVAHLDKSSNLYFELLFGAAKANAVMVSVNWRLAAPEILYILNDAEAEILFVGEEYFPVVEKIRDELKTVTKIVSLDARHGAWPSFDEWRDGFPDTDPGLPVRPADTAVQFYTSGTTGLPKGAELTNANFMFTFEHWSQSWLMKPGVTTIVCLPMFHIGGSGWGLAGLYAGATNHVMREFVPANVLATIERERIEVMLLVPAMILFLVQAPQIHETDLGSLKLIVYGAAPIPAALLKQAMSIFPCGFQQVYGLTETTGAITLLPTKDHDPSDARKLLSCGFAHTGVELRIVDDAGKDLPAGEVGEIAVRSPQVMHGYWRLPDATKRAIHGDWFYTGDAGYLDDKGYLFIYDRVKDMIVSGGENIYPAEVESALFGHPAVADVAVIGVPDERWGEAVKAIVVKKPAAAVTAGELIGWARERIAGYKLPKSVDFIDVLPRNPTGKILKRELRKPYWGDKQRQIN*