ggKbase home page

SCNpilot_cont_300_bf_scaffold_3197

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3197_1
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..836)
DNA (834bp) protein (278aa)
Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D225_9RHOB
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EEX14063.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citr
branched-chain amino acid ABC transporter, periplasmic substrate-binding protein
SCNpilot_cont_300_bf_scaffold_3197_2
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1060..1752
DNA (693bp) protein (231aa)
GntR family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C6Z0_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EIM77592.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3197_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1832..3181)
DNA (1350bp) protein (450aa)
Xanthine/uracil permease n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YH15_PARAH rbh
xanthine/uracil permease rbh
Xanthine/uracil permease {ECO:0000313|EMBL:AGT10763.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminop
SCNpilot_cont_300_bf_scaffold_3197_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..3730)
DNA (501bp) protein (167aa)
CMP/dCMP deaminase zinc-binding protein (EC:3.5.4.-)
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:AGT10762.1}; EC=3.5.4.- {ECO:0000313|EMBL:AGT10762.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZP4_PARAH
SCNpilot_cont_300_bf_scaffold_3197_5
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3946..4416
DNA (471bp) protein (157aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZX6_PARAH
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGT10761.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Par
SCNpilot_cont_300_bf_scaffold_3197_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4759..5700
DNA (942bp) protein (314aa)
phosphohydrolase n=1 Tax=Rhizobium phaseoli RepID=UPI0002F09B44
Orf_Bo164 {ECO:0000313|EMBL:AAZ50548.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefa
metal dependent phosphohydrolase
SCNpilot_cont_300_bf_scaffold_3197_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5955..7328
DNA (1374bp) protein (458aa)
yddV; diguanylate cyclase YddV (EC:2.7.7.65) rbh
Diguanylate cyclase YddV {ECO:0000313|EMBL:AEI05979.1}; EC=2.7.7.65 {ECO:0000313|EMBL:AEI05979.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Diguanylate cyclase YddV n=2 Tax=Oligotropha carboxidovorans RepID=B6JHB4_OLICO rbh
SCNpilot_cont_300_bf_scaffold_3197_8
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7402..8949
DNA (1548bp) protein (516aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E7AD1 rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJZ18009.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
methyl-accepting chemotaxis protein
SCNpilot_cont_300_bf_scaffold_3197_9
unknown

Not on your lists

comp(8862..9272)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3197_10
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9487..9879
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PLP3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ88174.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_3197_11
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10017..10355)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197C45
Uncharacterized protein {ECO:0000313|EMBL:KGY76597.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3197_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10376..11152)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TRL3_PHAFV rbh
Uncharacterized protein {ECO:0000313|EMBL:EPY01170.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_3197_13
Aeromonas molluscorum, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11149..11679)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F0DCE
MarR family transcriptional regulator {ECO:0000313|EMBL:EOD55871.1}; TaxID=1268236 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3197_14
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12377..12697
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Caulobacter crescentus OR37 RepID=R0D673_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:KGF69476.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ferredoxin
SCNpilot_cont_300_bf_scaffold_3197_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12727..14013
DNA (1287bp) protein (429aa)
Cytochrome P450 family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BYG7_HYPNA rbh
Cytochrome P450 family protein {ECO:0000313|EMBL:CDX45331.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
cytochrome P450 family protein
SCNpilot_cont_300_bf_scaffold_3197_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14135..14788)
DNA (654bp) protein (218aa)
AraC family transcriptional regulator n=1 Tax=Loktanella hongkongensis RepID=UPI0003800DBA
Uncharacterized protein {ECO:0000313|EMBL:KGF69470.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3197_17
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15184..16419)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038100EA rbh
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:KGF69475.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoefle
class III aminotransferase
Displaying 17 items

View Taxonomy